1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
CAGTGCAGCATACCCACCTATACATCCCTTGTTGCTGTGGGGAACCTTCAATTTCAGCTATGGGAGACAGCCAGTACTCGTTTTCGCTCACCACTTTCAGgtttgtgcacctcggtcgcgcagcctcttggattttgtgggatgggcctctggcaatggtagatagtgattgatccgcatgcgaggattacccatgtctt...
species | Physcomitrella patens |
transcript | PP1S61_202V6.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ATTTCAGCTATGGGAGACAGCCAGTACTCGTTTTCGCTCACCACTTTCAG TCCGTCTGGAAAATTGGTGCAGATCGAATATGCCTTGATGGCTGTAGGTGCEST: gi|18347210|gb|BJ179256.1|BJ179256
genomic: ATTTCAGCTATGGGAGACAGCCAGTACTCGTTTTCGCTCACCACTTTCAGgtttgtgcac ... tctgcggcagTCCGTCTGGAAAATTGGTGCAGATCGAATATGCCTTGATGGCTGTAGGTGC
EST: ATTTCAGCTATGGGAGACAGCCAGTACTCGTTTTCGCTCACCACTTTCAG TCCGTCTGGAAAATTGGTGCAGATCGAATATGCCTTGATGGCTGTAGGTGCEST: gi|162275765|gb|FC451936.1|FC451936
genomic: ATTTCAGCTATGGGAGACAGCCAGTACTCGTTTTCGCTCACCACTTTCAGgtttgtgcac ... tctgcggcagTCCGTCTGGAAAATTGGTGCAGATCGAATATGCCTTGATGGCTGTAGGTGC
EST: ATTTCAGCTATGGGAGACAGCCAGTACTCGTTTTCGCTCACCACTTTCAG TCCGTCTGGAAAATTGGTGCAGATCGAATATGCCTTGATGGCTGTAGGTGCEST: gi|162162081|gb|FC338872.1|FC338872
genomic: ATTTCAGCTATGGGAGACAGCCAGTACTCGTTTTCGCTCACCACTTTCAGgtttgtgcac ... tctgcggcagTCCGTCTGGAAAATTGGTGCAGATCGAATATGCCTTGATGGCTGTAGGTGC
EST: ATTTCAGCTATGGGAGACAGCCAGTACTCGTTTTCGCTCACCACTTTCAG TCCGTCTGGAAAATTGGTGCAGATCGAATATGCCTTGATGGCTGTAGGTGCEST: gi|162272507|gb|FC448509.1|FC448509
genomic: ATTTCAGCTATGGGAGACAGCCAGTACTCGTTTTCGCTCACCACTTTCAGgtttgtgcac ... tctgcggcagTCCGTCTGGAAAATTGGTGCAGATCGAATATGCCTTGATGGCTGTAGGTGC
EST: ATTTCAGCTATGGGAGACAGCCAGTACTCGTTTTCGCTCACCACTTTCAG TCCGTCTGGAAAATTGGTGCAGATCGAATATGCCTTGATGGCTGTAGGTGC
genomic: ATTTCAGCTATGGGAGACAGCCAGTACTCGTTTTCGCTCACCACTTTCAGgtttgtgcac ... tctgcggcagTCCGTCTGGAAAATTGGTGCAGATCGAATATGCCTTGATGGCTGTAGGTGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAGTGCAGCATACCCACCTATACATCCCTTGTTGCTGTGGGGAACCTTCAATTTCAGCTATGGGAGACAGCCAGTACTCGTTTTCGCTCACCACTTTCAGgtttgtgcacctcggtcgcgcagcctcttggattttgtgggatgggcctctggcaatggtagatagtgattgatccgcatgcgaggattacccatgtctt
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