Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|67692114|gb|BJ952347.1|BJ952347EST: CCACCAAAATTGTTTTGCGGGCTGTCCCTCCCTCTACCCCCAATTTGAAG GCTTTGGAAGTGGAGTTTAACAACAGAGACAAATACATCTACTCTGCAGAA
genomic: CCACCAAAATTGTTTTGCGGGCTGTCCCTCCCTCTACCCCCAATTTGAAGgtaagctgtt ... atatttgcagGCTTTGGAAGTGGAGTTTAACAACAGAGACAAATACATCTACTCTGCAGAA
EST:
gi|208397044|gb|DC928887.1|DC928887EST: CCACCAAAATTGTTTTGCGGGCTGTCCCTCCCTCTACCCCCAATTTGAAG GCTTTGGAAGTGGAGTTTAACAACAGAGACAAATACATCTACTCTGCAGAA
genomic: CCACCAAAATTGTTTTGCGGGCTGTCCCTCCCTCTACCCCCAATTTGAAGgtaagctgtt ... atatttgcagGCTTTGGAAGTGGAGTTTAACAACAGAGACAAATACATCTACTCTGCAGAA
EST:
gi|162195767|gb|FC371158.1|FC371158EST: CCACCAAAATTGTTTTGCGGGCTGTCCCTCCCTCTACCCCCAATTTGAAG GCTTTGGAAGTGGAGTTTAACAACAGAGACAAATACATCTACTCTGCAGAA
genomic: CCACCAAAATTGTTTTGCGGGCTGTCCCTCCCTCTACCCCCAATTTGAAGgtaagctgtt ... atatttgcagGCTTTGGAAGTGGAGTTTAACAACAGAGACAAATACATCTACTCTGCAGAA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TTGTCTTATACGAGGCCTCGCTACCTCTTTCTCTTCCTCCCCCATTTGTGCCACCAAAATTGTTTTGCGGGCTGTCCCTCCCTCTACCCCCAATTTGAAGgtaagctgtttgcaatccacgttggtaaacgtcttatctcatcttgtacttgccatccttttgtttcgcattctataagctttcttcttatgcagcgttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG