Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|67692114|gb|BJ952347.1|BJ952347EST: CGGAAGATGCTCCTG-TGGAGCGGTCCCCGAGGACGCGAATCAAC AATGTCCTGGGACGATTGTCTTGGGATTGTCTTATACGAGGCCTCGCTACC
genomic: CGGAAGATGCTCCTGTTGGAGCGGTCCCCGAGGACGCGAATCAACgtaagtttgt ... tatgaaacagATTGTCCTGGGACGATTGTCTTGGGATTGTCTTATACGAGGCCTCGCTACC
EST:
gi|162195767|gb|FC371158.1|FC371158EST: AAAAACGGAAGATGCTCCTGTTGGAGCGGTCCCCGAGGACGCGAATCAAC ATTGTCCTGGGACGATTGTCTTGGGATTGTCTTATACGAGGCCTCGCTACC
genomic: AAAAACGGAAGATGCTCCTGTTGGAGCGGTCCCCGAGGACGCGAATCAACgtaagtttgt ... tatgaaacagATTGTCCTGGGACGATTGTCTTGGGATTGTCTTATACGAGGCCTCGCTACC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
AGAGGTTCTTGTGTGAGGGGCTTGATTGTGAAAAGGAGTCTAATGGTGGAAAAAACGGAAGATGCTCCTGTTGGAGCGGTCCCCGAGGACGCGAATCAACgtaagtttgtttccttgtggaatcttgtctatgtggtttagctcttgatgcgattgttgtttgtgcatgggcaaaagttttggttggaggaatctgtgta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG