1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
...gtgaggctttaagcaatggattggagaccatgttcacaatgcttcgattctttttgaatttatgtgtcagttgataacagtcggagctgtccgttgacagATTTTGAAGGAGATCGAGTCTGACTTGGCTCGTTTCAAATGCGGCATTGCTCATCTCTTTT
species | Physcomitrella patens |
transcript | PP1S397_39V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CAGTCACACTTCCTTCTAAAAAGCGTGGATGCCATCTTATTACATCCACG ATTTTGAAGGAGATCGAGTCTGACTTGGCTCGTTTCAAATGCGGCATTGCTEST: gi|18365047|gb|BJ197121.1|BJ197121
genomic: CAGTCACACTTCCTTCTAAAAAGCGTGGATGCCATCTTATTACATCCACGgttagcaaaa ... ccgttgacagATTTTGAAGGAGATCGAGTCTGACTTGGCTCGTTTCAAATGCGGCATTGCT
EST: CAGTCACACTTCCTTCTAAAAAGCGTGGATGCCATCTTATTACATCCACG ATTTTGAAGGAGATCGAGTCTGACTTGGCTCGTTTCAAATGCGGCATTGCT
genomic: CAGTCACACTTCCTTCTAAAAAGCGTGGATGCCATCTTATTACATCCACGgttagcaaaa ... ccgttgacagATTTTGAAGGAGATCGAGTCTGACTTGGCTCGTTTCAAATGCGGCATTGCT
gattctttttgaatttatgtgtcagttgataacagtcggagctgtccgttgacagATTTTGAAGGAGATCGAGTCTGACTTGGCTCGTTTCAAATGCGGCATTGCTCATCTCTTTT
tgataac putative branch site (score: 16)
tttttgaatttatgt TA-rich tract