1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
...tcacgacttgatatggttttcctctgtaaccaaacctgtaaactccttttaaatgtgccctgtagaaccttacaaaagtaacaatggttgcctgaaacagATATTCCTTGAATCAGATGGCTACGAAGAAATCAACATCAAGCCTAGTAACTGGTGACGAGAATGGGTCCCCAAAGTGGGCGCAGAAGACAGTCACACTT
species | Physcomitrella patens |
transcript | PP1S397_39V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TTTCTGTGTGAGTCGCGGAGGATCTTGTAGTCTCTTTTGTTGAGGCTGAG ATATTCCTTGAATCAGATGGCTACGAAGAAATCAACATCAAGCCTAGTAAC
genomic: TTTCTGTGTGAGTCGCGGAGGATCTTGTAGTCTCTTTTGTTGAGGCTGAGgtgatcgttt ... cctgaaacagATATTCCTTGAATCAGATGGCTACGAAGAAATCAACATCAAGCCTAGTAAC
cttttaaatgtgccctgtagaaccttacaaaagtaacaatggttgcctgaaacagATATTCCTTGAATCAGATGGCTACGAAGAAATCAACATCAAGCCTAGTAACTGGTGACGAGAATGGGTCCCCAAAGTGGGCGCAGAAGACAGTCACACTT
aagtaac putative branch site (score: 20)
ttacaaaa TA-rich tract