1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
...tgatatagcttattttcctcaaggtgtcgcagtggcgatagagccgagttttgcaattgagcagaaaatgatgggaattgctgattttttgggagcgcagAGAATATAATGAAGAAGGTTCCGGAGGATCGGTACGCGCAATGGAAGTTGCTTGTCCCAGCTTTGTATGACTGGCTGACCAATCATCACCTTATGTGGCC
species | Physcomitrella patens |
transcript | PP1S206_25V6.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CTCACGATTGCAATCTCGAACGCTCACTCAACGTCATTCAGCTGAATCGT AGAATATAATGAAGAAGGTTCCGGAGGATCGGTACGCGCAATGGAAGTTGCEST: gi|162192559|gb|FC370606.1|FC370606
genomic: CTCACGATTGCAATCTCGAACGCTCACTCAACGTCATTCAGCTGAATCGTgtaaggtttt ... gggagcgcagAGAATATAATGAAGAAGGTTCCGGAGGATCGGTACGCGCAATGGAAGTTGC
EST: CTCACGATTGCAATCTCGAACGCTCACTCAACGTCATTCAGCTGAATCGT AGAATATAATGAAGAAGGTTCCGGAGGATCGGTACGCGCAATGGAAGTTGC
genomic: CTCACGATTGCAATCTCGAACGCTCACTCAACGTCATTCAGCTGAATCGTgtaaggtttt ... gggagcgcagAGAATATAATGAAGAAGGTTCCGGAGGATCGGTACGCGCAATGGAAGTTGC
gagttttgcaattgagcagaaaatgatgggaattgctgattttttgggagcgcagAGAATATAATGAAGAAGGTTCCGGAGGATCGGTACGCGCAATGGAAGTTGCTTGTCCCAGCTTTGTATGACTGGCTGACCAATCATCACCTTATGTGGCC
tgctgat putative branch site (score: 3)
ttttttg CT-rich tract
tgatttttt TA-rich tract