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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...tgctttttttgtatgatttttcactcattcgtgcatatcacgtagtgatgcatcactgaaaaatgtaatgctgccctgacattatattctgttctttcagGTTGTTGTCATGAGTTCTGCATCAAATGTGCTCTTTATCTTTGCTCAACGAGCAATACCCGTGTTGAGTTCACTGGCCCACCTGGATCGATTCCGTGCCC

Basic information

species Oryza sativa
transcript LOC_Os10g37730.3
intron # 8
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tgatgcatcactgaaaaatgtaatgctgccctgacattatattctgttctttcagGTTGTTGTCATGAGTTCTGCATCAAATGTGCTCTTTATCTTTGCTCAACGAGCAATACCCGTGTTGAGTTCACTGGCCCACCTGGATCGATTCCGTGCCC
                            ccctgac  putative branch site (score: 3)
                                       tattctgttctttc  putative PPT
             aaaaatgtaat  TA-rich tract