1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gtgaatgagaaaatgcatgcaaatcgatttcatcatcactgtaaacgtctctgtttgagtttgattggatcgatctcttcctctggtaattaatgcaactgtgtgcgagtaaattaattcatggatgcgcatgcagTGTCTTGGGGTGCCCTCTGAACGGTGTCAATTACATCGAGACAGGTGATCTGGCGAGCCTCCCTCTTCTGTGCCACTACCCTGTCAAG
species | Oryza sativa |
transcript | LOC_Os01g58640.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: AGGCCCGACCGCTCCCACTGGCTCGCCATGATCACGCCTTCAAACTCCAG TGTCTTGGGGTGCCCTCEST: gi|88389405|gb|CI600574.1|CI600574
genomic: AGGCCCGACCGCTCCCACTGGCTCGCCATGATCACGCCTTCAAACTCCAGgtgaatgaga ... gcgcatgcagTGTCTTGGGGTGCCCTC
EST: AGGCCCGACCGCTCCCACTGGCTCGCCATGATCACGCCTTCAAACTCCAG TGTCTTGGGGTGCCCTCTGAAGGGTGTCAATTACATCGAGAAAGGTGATCT
genomic: AGGCCCGACCGCTCCCACTGGCTCGCCATGATCACGCCTTCAAACTCCAGgtgaatgaga ... gcgcatgcagTGTCTTGGGGTGCCCTCTGAACGGTGTCAATTACATCGAGACAGGTGATCT
tctggtaattaatgcaactgtgtgcgagtaaattaattcatggatgcgcatgcagTGTCTTGGGGTGCCCTCTGAACGGTGTCAATTACATCGAGACAGGTGATCTGGCGAGCCTCCCTCTTCTGTGCCACTACCCTGTCAAG
aattaat putative branch site (score: 3)
agtaaattaattcat TA-rich tract