1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtaagtgctctactactatttactaagatttttccacatgcaatccttgctcaataagttgtcttgctaatgtttttacgatctcttcagGCACTCAGCATACAACAGCTTGAGCGCATAGTTAGTATGTACTGGGATGACATCAATGGTTCAAACGCTATCTCAGCAGAG
species | Oryza sativa |
transcript | LOC_Os01g51630.1 |
intron # | 9 |
splice site | 3' |
intron type | U2 |
EST: CCCTCAAACCAATGAGGACACTGAAAGAGATACGCACTGATGTGTGCCCT GCACTCAGCATACAACAGCTTGAGCGCATAGTTAGTATGTACTGGGATGACEST: gi|29628568|gb|CB633579.1|CB633579
genomic: CCCTCAAACCAATGAGGACACTGAAAGAGATACGCACTGATGTGTGCCCTgtaagtgctc ... atctcttcagGCACTCAGCATACAACAGCTTGAGCGCATAGTTAGTATGTACTGGGATGAC
EST: CCCTCAAACCAATGAGGACACTGAAAGAGATACGCACTGATGTGTGCCCT GCACTCAGCATACAACAGCTTGAGCGCATAGTTAGTATGTACTGGGATGACEST: gi|29629431|gb|CB634440.1|CB634440
genomic: CCCTCAAACCAATGAGGACACTGAAAGAGATACGCACTGATGTGTGCCCTgtaagtgctc ... atctcttcagGCACTCAGCATACAACAGCTTGAGCGCATAGTTAGTATGTACTGGGATGAC
EST: CCCTCAAACCAATGAGGACACTGAAAGAGATACGCACTGATGTGTGCCCT GCACTCAGCATACAACAGCTTGAGCGCATAGTTAGTATGTACTGGGATGAC
genomic: CCCTCAAACCAATGAGGACACTGAAAGAGATACGCACTGATGTGTGCCCTgtaagtgctc ... atctcttcagGCACTCAGCATACAACAGCTTGAGCGCATAGTTAGTATGTACTGGGATGAC
acatgcaatccttgctcaataagttgtcttgctaatgtttttacgatctcttcagGCACTCAGCATACAACAGCTTGAGCGCATAGTTAGTATGTACTGGGATGACATCAATGGTTCAAACGCTATCTCAGCAGAG
tgctaat putative branch site (score: 2)
tctcttc putative PPT
taatgttttta TA-rich tract