1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
...ctaaagatgggtatttttagtcccggattcgtactcccggttgtataaccgggactataggggggtttctaaccgggagtaaagcccctttctctaccagTGCGAGGTCCTCATGGAGATTTTTATCAGGCTGCCGGCGAAAACTCTTGCTCGTTTCAAGTCTGTCTGCAAGGCATGGCACACCATCATCTCTGAACCAT
species | Oryza sativa |
transcript | LOC_Os01g45020.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CTCAAAACATACAAGAGGAGAAGAGTGAACAGGGCTACCATCCCTCAGTTGTEST: gi|58683739|gb|CK072426.1|CK072426
genomic: CTCAAAACATACAAGAGGAGAAGAGTGAACAGGGCTTCCATCCCTCAG-T-Tgttagacgac ... tctctacca
EST: CTCAAAACATACAAGAGGAGAAGAGTGAACAGGGCTTCCATCCCTCAGTT GEST: gi|58683739|gb|CK072426.1|CK072426
genomic: CTCAAAACATACAAGAGGAGAAGAGTGAACAGGGCTTCCATCCCTCAGTTgttagacgac ... tctctaccag-
EST: CTCAAAACATACAAGAGGAGAAGAGTGAACAGGGCTTCCATCCCTCAGTT GEST: gi|58612562|gb|CK040274.1|CK040274
genomic: CTCAAAACATACAAGAGGAGAAGAGTGAACAGGGCTTCCATCCCTCAGTTgttagacgac ... tctctaccag-
EST: CTCAAAACATACAAGAGGAGAAGAGTGAACAGGGCTTCCATCCCTCAGTT GEST: gi|58612562|gb|CK040274.1|CK040274
genomic: CTCAAAACATACAAGAGGAGAAGAGTGAACAGGGCTTCCATCCCTCAGTTgttagacgac ... tctctaccag-
EST: CTCAAAACATACAAGAGGAGAAGAGTGAACAGGGCTTCCATCCCTCAGTT GEST: gi|58654783|gb|CK043463.1|CK043463
genomic: CTCAAAACATACAAGAGGAGAAGAGTGAACAGGGCTTCCATCCCTCAGTTgttagacgac ... tctctaccag-
EST: CTCAAAACATACAAGAGGAGAAGAGTGAACAGGGCTTCCATCCCTCAGTTGTEST: gi|58670939|gb|CK059625.1|CK059625
genomic: CTCAAAACATACAAGAGGAGAAGAGTGAACAGGGCTTCCATCCCTCAG-T-Tgttagacgac ... tctctacca
EST: CTCAAAACATACAAGAGGAGAAGAGTGAACAGGGCTTCCATCCCTCAGTT GEST: gi|58670939|gb|CK059625.1|CK059625
genomic: CTCAAAACATACAAGAGGAGAAGAGTGAACAGGGCTTCCATCCCTCAGTTgttagacgac ... tctctaccag-
EST: CTCAAAACATACAAGAGGAGAAGAGTGAACAGGGCTTCCATCCCTCAGTT GEST: gi|58659343|gb|CK048023.1|CK048023
genomic: CTCAAAACATACAAGAGGAGAAGAGTGAACAGGGCTTCCATCCCTCAGTTgttagacgac ... tctctaccag-
EST: CTCAAAACATACAAGAGGAGAAGAGTGAACAGGGCTTCCATCCCTCAGTTGTEST: gi|58668111|gb|CK056797.1|CK056797
genomic: CTCAAAACATACAAGAGGAGAAGAGTGAACAGGGCTTCCATCCCTCAG-T-Tgttagacgac ... tctctacca
EST: CTCAAAACATACAAGAGGAGAAGAGTGAACAGGGCTTCCATCCCTCAGTT GEST: gi|58668111|gb|CK056797.1|CK056797
genomic: CTCAAAACATACAAGAGGAGAAGAGTGAACAGGGCTTCCATCCCTCAGTTgttagacgac ... tctctaccag-
EST: CTCAAAACATACAAGAGGAGAAGAGTGAACAGGGCTTCCATCCCTCAGTT G
genomic: CTCAAAACATACAAGAGGAGAAGAGTGAACAGGGCTTCCATCCCTCAGTTgttagacgac ... tctctaccag-
taaccgggactataggggggtttctaaccgggagtaaagcccctttctctaccagTGCGAGGTCCTCATGGAGATTTTTATCAGGCTGCCGGCGAAAACTCTTGCTCGTTTCAAGTCTGTCTGCAAGGCATGGCACACCATCATCTCTGAACCAT
ttctaac putative branch site (score: 1)
cccctttctctacc putative PPT
tttctaa TA-rich tract