Skip to another splice site:
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 5'  3'   		2  
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGTTCTCGCAGATGCAATGGCGATTGCCATGGCGATCAGAACCCAGCTACTCGCAGGGTCATACGCTCCCAGTTCCTCCAACTCAAGAATTTCATCAATGgtaacacccttctctttactacatttaattttctctgtttttccctaaccagctaactaatcataacag

Basic information

species Glycine max
transcript GLYMA20G39130.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|15201613|gb|BI424966.1|BI424966
EST:     TCGCAGGGTCATACGCTCCCAGTTCCTCCAACTCAAGAATTTCATCAATG                         AGAAAAGAGATGATTTGATGAACACGGAGTCCGACAAGTTCGACACCATCT
genomic: TCGCAGGGTCATACGCTCCCAGTTCCTCCAACTCAAGAATTTCATCAATGgtaacaccct ... atcataacagAGAAAAGAGATGATTTGATGAACACGGAGTCCGACAAGTTCGACACCATCT
EST: gi|18848422|gb|BM567660.1|BM567660
EST:     TCGCAGGGTCATACGCTCCCAGTTCCTCCAACTCAAGAATTTCATCAATG                         AGAAAAGAGATGATTTGATGAACACGGAGTCCGACAAGTTCGACACCATCT
genomic: TCGCAGGGTCATACGCTCCCAGTTCCTCCAACTCAAGAATTTCATCAATGgtaacaccct ... atcataacagAGAAAAGAGATGATTTGATGAACACGGAGTCCGACAAGTTCGACACCATCT
EST: gi|193322768|gb|FK290432.1|FK290432
EST:     TCCAACTCAAGAATTTCATCAATG                         AGAAAAGAGATGATTTGATGAACACGGAGTCCGACAAGTTCGACACCATCT
genomic: TCCAACTCAAGAATTTCATCAATGgtaacaccct ... atcataacagAGAAAAGAGATGATTTGATGAACACGGAGTCCGACAAGTTCGACACCATCT
EST: gi|298182625|gb|HO031360.1|HO031360
EST:     TCGCAGGGTCATACGCTCCCAGTTCCTCCAACTCAAGAATTTCATCAATG                         AGAAAAGAGACGATTTGATGAGCACGGAGTCCGACAAGTTCGACACCATCT
genomic: TCGCAGGGTCATACGCTCCCAGTTCCTCCAACTCAAGAATTTCATCAATGgtaacaccct ... atcataacagAGAAAAGAGATGATTTGATGAACACGGAGTCCGACAAGTTCGACACCATCT
EST: gi|298176784|gb|HO023257.1|HO023257
EST:     TCGCAGGGTCATACGCTCCCAGTTCCTCCAACTCAAGAATTTCATCAATG                         AGAAAAGAGATGATTTGATGAACACGGAGTCCGACAAGTTCGACACCATCT
genomic: TCGCAGGGTCATACGCTCCCAGTTCCTCCAACTCAAGAATTTCATCAATGgtaacaccct ... atcataacagAGAAAAGAGATGATTTGATGAACACGGAGTCCGACAAGTTCGACACCATCT
EST: gi|7796792|gb|AW782186.1|AW782186
EST:     TCGCAGGGTCATACGCTCCCAGTTCCTCCAACTCAAGAATTTCATCAATG                         AGAAAAGAGATGATTTGATGAACACGGAGTCCGACAAGTTCGACACCATCT
genomic: TCGCAGGGTCATACGCTCCCAGTTCCTCCAACTCAAGAATTTCATCAATGgtaacaccct ... atcataacagAGAAAAGAGATGATTTGATGAACACGGAGTCCGACAAGTTCGACACCATCT
EST: gi|298196556|gb|HO041299.1|HO041299
EST:     TCGCAGGGTCATACGCTCCCAGTTCCTCCAACTCAAGAATTTCATCAATG                         AGAAAAGAGATGATTTGATGAACACGGAGTCCGACAAGTTCGACACCATCT
genomic: TCGCAGGGTCATACGCTCCCAGTTCCTCCAACTCAAGAATTTCATCAATGgtaacaccct ... atcataacagAGAAAAGAGATGATTTGATGAACACGGAGTCCGACAAGTTCGACACCATCT
EST: gi|18848632|gb|BM567773.1|BM567773
EST:     TCGCAGGGTCATACGCTCCCAGTTCCTCCAACTCAAGAATTTCATCAATG                         AGAAAAGAGATGATTTGATGAACACGGAGTCCGACAAGTTCGACACCATCT
genomic: TCGCAGGGTCATACGCTCCCAGTTCCTCCAACTCAAGAATTTCATCAATGgtaacaccct ... atcataacagAGAAAAGAGATGATTTGATGAACACGGAGTCCGACAAGTTCGACACCATCT
EST: gi|151410305|gb|EV280120.1|EV280120
EST:     TCGCAGGGTCATACGCTCCCAGTTCCTCCAACTCAAGAATTTCATCAATG                         AGAAAAGAGATGATTTGATGAACACGGAGTCCGACAAGTTCGACACCATCT
genomic: TCGCAGGGTCATACGCTCCCAGTTCCTCCAACTCAAGAATTTCATCAATGgtaacaccct ... atcataacagAGAAAAGAGATGATTTGATGAACACGGAGTCCGACAAGTTCGACACCATCT
EST: gi|298193670|gb|HO040318.1|HO040318
EST:     TCGCAGGGTCATACGCTCCCAGTTCCTCCAACTCAAGAATTTCATCAATG                         AGAAAAGAGATGATTTGATGAACACGGAGTCCGACAAGTTCGACACCATCT
genomic: TCGCAGGGTCATACGCTCCCAGTTCCTCCAACTCAAGAATTTCATCAATGgtaacaccct ... atcataacagAGAAAAGAGATGATTTGATGAACACGGAGTCCGACAAGTTCGACACCATCT
EST: gi|15201870|gb|BI425101.1|BI425101
EST:     TCGCAGGGTCATACGCTCCCAGTTCCTCCAACTCAAGAATTTCATCAATG                         AGAAAAGAGATGATTTGATGAACACGGAGTCCGACAAGTTCGACACCATCT
genomic: TCGCAGGGTCATACGCTCCCAGTTCCTCCAACTCAAGAATTTCATCAATGgtaacaccct ... atcataacagAGAAAAGAGATGATTTGATGAACACGGAGTCCGACAAGTTCGACACCATCT
EST: gi|192326780|gb|FK018907.1|FK018907
EST:     TCGCAGGGTCATACGCTCCCAGTTCCTCCAACTCAAGAATTTCATCAATG                         AGAAAAGAGATGATTTGATGAACACGGAGTCCGACAAGTTCGACACCATCT
genomic: TCGCAGGGTCATACGCTCCCAGTTCCTCCAACTCAAGAATTTCATCAATGgtaacaccct ... atcataacagAGAAAAGAGATGATTTGATGAACACGGAGTCCGACAAGTTCGACACCATCT