1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtgcatagctgacattatttctctacaagttgtcttgtactactttattattttattttatatattgatgttcccggatcttcttgatttcatttttggtagacatttttttaagtaattcacctgtttgttacagGGCCGTTCCTTCATCTCAGGCATCTGGTGGGTATTTCCTGTAATTGACTTTTTACCTTACATTAATTATATGCTTGAAATTTCCTTTAATTTACACTCAA
species | Glycine max |
transcript | GLYMA20G38790.2 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: AGGTTTCATTCTTCCTCATCTGTTGCTGGTGGCTTACCTCCACTTGGAAG GGCCGTTCCTTCATCTCAGGCATCTGGTGGGTATTTCCTGTAATTGACTTTEST: gi|151405233|gb|EV275047.1|EV275047
genomic: AGG---CATTCTTCCTCATCTGTTGCTGGTGGCTTACCTCCACTTGGAAGgtgcatagct ... tttgttacagGGCCGTTCCTTCATCTCAGGCATCTGGTGGGTATTTCCTGTAATTGACTTT
EST: CGAAGGCATTCTTCCTCATCTGTTGCTGGTGGCTTACCTCCACTTGGAAG GGCCGTTCCTTCATCTEST: gi|151408547|gb|EV278355.1|EV278355
genomic: CGAAGGCATTCTTCCTCATCTGTTGCTGGTGGCTTACCTCCACTTGGAAGgtgcatagct ... tttgttacagGGCCGTTCCTTCATCT
EST: AAGGCATTCTTCCTCATCTGTTTGCTGGTGGCTTACCTCCACTTGGAAAG GGCCGTTCCTTCATCTCAG-CATCTGEST: gi|192319101|gb|FK010637.1|FK010637
genomic: AAGGCATTCTTCCTCATCTGTT-GCTGGTGGCTTACCTCCACTTGGAA-Ggtgcatagct ... tttgttacagGGCCGTTCCTTCATCTCAGGCATCTG
EST: CGAAGGCATTCTTCCTCATCTGTTGCTGGTGGCTTACCTCCACTTGGAAA GGCCGTTCCTTCATCTCAG-CATCTGGGTGGGTATTTCCTGTAATTGACTTEST: gi|192319102|gb|FK010638.1|FK010638
genomic: CGAAGGCATTCTTCCTCATCTGTTGCTGGTGGCTTACCTCCACTTGGAAGgtgcatagct ... tttgttacagGGCCGTTCCTTCATCTCAGGCATCTGG-TGGGTATTTCCTGTAATTGACTT
EST: CGAAGGCATTCTTCCTCATCTGTTGCTGGTGGCTTACCTCCACTTGGAAG GGCCGTTCCTTCATCTCAGGCATCTGGTGGGTATTTCCTGTAATTGACTTTEST: gi|192325538|gb|FK018434.1|FK018434
genomic: CGAAGGCATTCTTCCTCATCTGTTGCTGGTGGCTTACCTCCACTTGGAAGgtgcatagct ... tttgttacagGGCCGTTCCTTCATCTCAGGCATCTGGTGGGTATTTCCTGTAATTGACTTT
EST: CGAAGGCATTCTTCCTCATCTGTTGCTGGTGGCTTACCTCCACTTGGAAG GGCCGTTCCTTCATC
genomic: CGAAGGCATTCTTCCTCATCTGTTGCTGGTGGCTTACCTCCACTTGGAAGgtgcatagct ... tttgttacagGGCCGTTCCTTCATC
tcttgatttcatttttggtagacatttttttaagtaattcacctgtttgttacagGGCCGTTCCTTCATCTCAGGCATCTGGTGGGTATTTCCTGTAATTGACTTTTTACCTTACATTAATTATATGCTTGAAATTTCCTTTAATTTACACTCAA
tcttgat putative branch site (score: 4)
cctgttt putative PPT
tagacatttttttaag TA-rich tract