1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
CAAGTTTGCAGAATATGAGAAGAAATACAGTGAGGAAGCTGCAGAGCTGAAGGCTATTATTACTGGTGAATTACCAGCTGGTTGGGAGAAAGCACTTCCGgtgagtaaactaacaaacttccaggtttctcttaatatttattctgggctaaatctccttattagttgaatgatgtctaatccaattttattggtgccct...
species | Glycine max |
transcript | GLYMA20G38720.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: AGGCTATTATTACTGGTGAATTACCAGCTGGTTGGGAGAAAGCACTTCCG ACATACACTCCAGAAAGCCCTGCTGATGCTACAAGAAATCTGTCTCAGCAAEST: gi|27808938|gb|CB063360.1|CB063360
genomic: AGGCTATTATTACTGGTGAATTACCAGCTGGTTGGGAGAAAGCACTTCCGgtgagtaaac ... caactttcagACATACACTCCAGAAAGCCCTGCTGATGCTACAAGAAATCTGTCTCAGCAA
EST: AGGCTATTATTACTGGTGAATTACCAGCTGGTTGGGAGAAAGCACTTCCG ACATACACTCCAGAAAGCCCTGCTGATGCTACAAGAAATCTGTCTCAGCAAEST: gi|16279267|gb|BI943346.1|BI943346
genomic: AGGCTATTATTACTGGTGAATTACCAGCTGGTTGGGAGAAAGCACTTCCGgtgagtaaac ... caactttcagACATACACTCCAGAAAGCCCTGCTGATGCTACAAGAAATCTGTCTCAGCAA
EST: AGGCTATTATTACTGGTGAATTACCAGCTGGTTGGGAGAAAGCACTTCCG ACATACACTCCAGAAAGCCCTGCTGATGCTACAAGAAATCTGTCTCAGCAAEST: gi|16284081|gb|BI945895.1|BI945895
genomic: AGGCTATTATTACTGGTGAATTACCAGCTGGTTGGGAGAAAGCACTTCCGgtgagtaaac ... caactttcagACATACACTCCAGAAAGCCCTGCTGATGCTACAAGAAATCTGTCTCAGCAA
EST: AGGCTATTATTACTGGTGAATTACCAGCTGGTTGGGAGAAAGCACTTCCG ACATACACTCCAGAAAGCCCTGCTGATGCTACAAGAAATCTGTCTCAGCAAEST: gi|209722231|gb|BW651248.1|BW651248
genomic: AGGCTATTATTACTGGTGAATTACCAGCTGGTTGGGAGAAAGCACTTCCGgtgagtaaac ... caactttcagACATACACTCCAGAAAGCCCTGCTGATGCTACAAGAAATCTGTCTCAGCAA
EST: AGGCTATTATTACTGGTGAATTACCAGCTGGTTGGGAGAAAGCACTTCCG ACATACACTCCAGAAAGCCCTGCTGATGCTACAAGAAATCTGTCTCAGCAAEST: gi|7692105|gb|AW760220.1|AW760220
genomic: AGGCTATTATTACTGGTGAATTACCAGCTGGTTGGGAGAAAGCACTTCCGgtgagtaaac ... caactttcagACATACACTCCAGAAAGCCCTGCTGATGCTACAAGAAATCTGTCTCAGCAA
EST: AGGCTATTATTACTGGTGAATTACCAGCTGGTTGGGAGAAAGCACTTNCG ACATACACTCCAGANAGCCCTGCTGATGCTANCA-GAAATCTGTCTEST: gi|120532309|gb|EH260442.1|EH260442
genomic: AGGCTATTATTACTGGTGAATTACCAGCTGGTTGGGAGAAAGCACTTCCGgtgagtaaac ... caactttcagACATACACTCCAGAAAGCCCTGCTGATGCTA-CAAGAAATCTGTCT
EST: AGGCTATTATTACTGGTGAATTACCAGCTGGTTGGGAGAAAGCACTTCCG ACATACACTCCAGAAAGCCCTGCTGATGCTACAAGAAATCTGTCTCAGCAAEST: gi|17401949|gb|BM178731.1|BM178731
genomic: AGGCTATTATTACTGGTGAATTACCAGCTGGTTGGGAGAAAGCACTTCCGgtgagtaaac ... caactttcagACATACACTCCAGAAAGCCCTGCTGATGCTACAAGAAATCTGTCTCAGCAA
EST: AGGCTATTATTACTGGTGAATTACCAGCTGGTTGGGAGAAAGCACTTCCG ACATACACTCCAGAAAGCCCTGCTGATGCTACAAGAAATCTGTCTCAGCAA
genomic: AGGCTATTATTACTGGTGAATTACCAGCTGGTTGGGAGAAAGCACTTCCGgtgagtaaac ... caactttcagACATACACTCCAGAAAGCCCTGCTGATGCTACAAGAAATCTGTCTCAGCAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAAGTTTGCAGAATATGAGAAGAAATACAGTGAGGAAGCTGCAGAGCTGAAGGCTATTATTACTGGTGAATTACCAGCTGGTTGGGAGAAAGCACTTCCGgtgagtaaactaacaaacttccaggtttctcttaatatttattctgggctaaatctccttattagttgaatgatgtctaatccaattttattggtgccct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA