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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTGAAAAGGTTACTGAAGTTGGATGGTACGTTCTTGGCGAGGATCAACAACAGATTGGCCCTTACGCCTTCTCTGAGTTGTGCCGTGAGTTGAgttatttgaaactgtctctctctctgttttttttttttgaatgaacaaagtggagtggagctagggctaggtattgtacattttgatttttgttgtttgttccccaattaattaagtgaattccgaggctgcactgtttcag

Basic information

species Glycine max
transcript GLYMA20G36110.2
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193485923|gb|FK452138.1|FK452138
EST:     CTTACGCCTTCTCTGAGTTGTGCCGTGA---G-                         ACTTTGGGCACATTTGTTTTATGGTGAAATTGAAACCTCTATTGTCATATT
genomic: CTTACGCCTTCTCTGAGTTGTGCCGTGAGTTGAgttatttgaa ... actgtttcagACTTTGGGCACATTTGTTTTATGGTGAAATTGAAACCTCTATTGTCATATT
EST: gi|213602718|gb|DB956626.1|DB956626
EST:     TCAACAACAGATTGGCCCTTACGCCTTCTCTGAGTTGTGCCGTGAGTTGA                         ACTTTGGGCACATTTGTTTTATGGTGAAATTGAAACCTCTATTGTCATATT
genomic: TCAACAACAGATTGGCCCTTACGCCTTCTCTGAGTTGTGCCGTGAGTTGAgttatttgaa ... actgtttcagACTTTGGGCACATTTGTTTTATGGTGAAATTGAAACCTCTATTGTCATATT