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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTTGGCTCACAAGATTATTGCTGGAGCTGACTTTATAGTGATCCCAAGTAGATTTGAACCCTGTGGTCTTGTTCAGTTGCATGCCATGCCATATGGAACGgtatagactatgcccttctttttctctatttccttctcatctacaccttggtgttcccttacaacattatttttactctttaaacattaaatgtctgtgaaag

Basic information

species Glycine max
transcript GLYMA20G36040.1
intron # 11
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208281297|gb|GE075503.1|GE075503
EST:     GATTTGAACCCTGTGGTCTAGTTCAGTTGCATGCCATGCCATATGGAACG                         GTGCCCATTGTTTCCTCCACTGGTGGACTCGTTGACACCGTTCAAGAAGGG
genomic: GATTTGAACCCTGTGGTCTTGTTCAGTTGCATGCCATGCCATATGGAACGgtatagacta ... tctgtgaaagGTGCCCATTGTTTCCTCCACTGGTGGACTTGTTGACACCGTTCAAGAAGGG
EST: gi|207706702|gb|GD687544.1|GD687544
EST:     GATTTGAACCCTGTGGTCTAGTTCAGTTGCATGCCATGCCATATGGAACG                         GTGCCCATTGTTTCCTCCACTGGTGGACTCGTTGA
genomic: GATTTGAACCCTGTGGTCTTGTTCAGTTGCATGCCATGCCATATGGAACGgtatagacta ... tctgtgaaagGTGCCCATTGTTTCCTCCACTGGTGGACTTGTTGA