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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCTGTTGCTGATATAATTCGTACAACCTTGGGACCCAGGTCCATGTTAAAAATGCTACTTGATGCTTCAGGAGgttagtgtatttatcttttaaattattttgtaacttag

Basic information

species Glycine max
transcript GLYMA20G35760.1
intron # 1
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA20G35760.1 (Glycine max), 5'ss of exon 1
lower sequence: Vv17s0000g08170.t01 (Vitis vinifera), 5'ss of exon 3
GCTGTTGCTGATATAATTCGTACAACCTTGGGACCCAGGTCCATGTTAAAAATGCTACTTGATGCTTCAGGAGgttagtgtattt--------------atcttttaaattattttgtaacttag------------------------------------------------
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GCTGTGGCTGACATAATCCGCACAACCTTGGGTCCAAGATCCATGTTGAAGATGTTACTTGATGCTGGAGGAGgtgatttgatttcagttgataagtagatgttttcagttctgttggaaatgaacctagggttcattaatttgataagtaacactttatccatcaaaaaata