1 5' 3' | 2 5' 3' | 3 5' 3' |
GATACTATCAATTTGCCATTCCCTACTTTCAATGCCTCTGAGCTCATTAAGTCGTTTGGTCAACGTGGTTTTTCTGCACAAGAGATGGTTGCCCTCTCTGgtaagcactcgcctatatatttataagttttgctatctttttatgttgaataatttcattgtaaacttatttcaaaatcaataaagctttcagtaccggc...
species | Glycine max |
transcript | GLYMA20G35680.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GTCGTTTGGTCAACGTGGTTTTTCTGCACAAGAGATGGTTGCCCTCTCTG GGGCTCATACACTAGGAGTGGCAAGGTGTGCTTCTTTCAAGAACCGATTGAEST: gi|254319125|gb|GR828853.1|GR828853
genomic: GTCGTTTGGTCAACGTGGTTTTTCTGCACAAGAGATGGTTGCCCTCTCTGgtaagcactc ... acatatgcagGGGCTCATACACTAGGAGTGGCAAGGTGTGCTTCTTTCAAGAACCGATTGA
EST: GTCGTTTGGTCAACGTGGTTTTTCTGCACAAGAGATGGTTGCCCTCTCTG GGGCTCATACACTAGGAGTGGCAAGGTGTGCTTCTTTCAAGAACCGATTGAEST: gi|192312757|gb|FK005397.1|FK005397
genomic: GTCGTTTGGTCAACGTGGTTTTTCTGCACAAGAGATGGTTGCCCTCTCTGgtaagcactc ... acatatgcagGGGCTCATACACTAGGAGTGGCAAGGTGTGCTTCTTTCAAGAACCGATTGA
EST: GTCGTTTGGTCAACGTGGTTTTTCTGCACAAGAGATGGTTGCCCTCTCTG GGGCTCATACACTAEST: gi|192322806|gb|FK014497.1|FK014497
genomic: GTCGTTTGGTCAACGTGGTTTTTCTGCACAAGAGATGGTTGCCCTCTCTGgtaagcactc ... acatatgcagGGGCTCATACACTA
EST: GTCGTTTGGTCAACGTGGTTTTTCTGCACAAGAGATGGTTGCCCTCTCTG GGGCTCATACACTAGGAGTGGCAAGGTGTGCTTCTTTCAAGAACCGATTGAEST: gi|8282772|gb|BE020333.1|BE020333
genomic: GTCGTTTGGTCAACGTGGTTTTTCTGCACAAGAGATGGTTGCCCTCTCTGgtaagcactc ... acatatgcagGGGCTCATACACTAGGAGTGGCAAGGTGTGCTTCTTTCAAGAACCGATTGA
EST: GTCGTTTGGTCAACGTGGTTTTTCTGCACAAGAGATGGTTGCCCTCTCTG GGGCTCATACACTAGGAGTGGCAAGGTGTGCTTCTTTCAAGAACCGATTGAEST: gi|192316790|gb|FK006493.1|FK006493
genomic: GTCGTTTGGTCAACGTGGTTTTTCTGCACAAGAGATGGTTGCCCTCTCTGgtaagcactc ... acatatgcagGGGCTCATACACTAGGAGTGGCAAGGTGTGCTTCTTTCAAGAACCGATTGA
EST: GTCGTTTGGTCAACGTGGTTTTTCTGCACAAGAGATGGTTGCCCTCTCTG GGGCTCATACACTAG-AGTGGEST: gi|16345044|gb|BI970639.1|BI970639
genomic: GTCGTTTGGTCAACGTGGTTTTTCTGCACAAGAGATGGTTGCCCTCTCTGgtaagcactc ... acatatgcagGGGCTCATACACTAGGAGTGG
EST: GTCGTTTGGTCAACGTGGTTTTTCTGCACAAGAGATGGTTGCCCTCTCTG GGGCTCATACACTAGGAGTGGCAAGGTGTGCTTCTTTCAAGAACCGATTGA
genomic: GTCGTTTGGTCAACGTGGTTTTTCTGCACAAGAGATGGTTGCCCTCTCTGgtaagcactc ... acatatgcagGGGCTCATACACTAGGAGTGGCAAGGTGTGCTTCTTTCAAGAACCGATTGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATACTATCAATTTGCCATTCCCTACTTTCAATGCCTCTGAGCTCATTAAGTCGTTTGGTCAACGTGGTTTTTCTGCACAAGAGATGGTTGCCCTCTCTGgtaagcactcgcctatatatttataagttttgctatctttttatgttgaataatttcattgtaaacttatttcaaaatcaataaagctttcagtaccggc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG