1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
CCAGAATTGGATGACTGTAAAAGCTGAAAAAATAGTGTTTCCTGGAGGCGGGACTCATTTTCATTATGGAGCTGACAAGTACATAGCATCAATTGCAAATgtatgtctgcatctgattttactggttttgcatataaaaaaatgacaccatatatattttgttttagaattgggagttctatgagattttatgtgtgttt...
species | Glycine max |
transcript | GLYMA20G35120.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GGACTCATTTTCATTATGGAGCTGACAAGTACATAGCATCAATTGCAAAT ATGCTTAACTTTTCAAACAATAATCTAAACAATGAAGGAAGGTTGCGGACAEST: gi|4405738|gb|AI507887.1|AI507887
genomic: GGACTCATTTTCATTATGGAGCTGACAAGTACATAGCATCAATTGCAAATgtatgtctgc ... gcattgccagATGCTTAACTTTTCAAACAATAATCTAAACAATGAAGGAAGGTTGCGGACA
EST: GGACTCATTTTCATTATGGAGCTGACAAGTACATAGCATCAATTGCAAAT ATGCTTAACTTTTCAAACAATAATCTAAACAATGAAGGAAGGTTGCGGACA
genomic: GGACTCATTTTCATTATGGAGCTGACAAGTACATAGCATCAATTGCAAATgtatgtctgc ... gcattgccagATGCTTAACTTTTCAAACAATAATCTAAACAATGAAGGAAGGTTGCGGACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCAGAATTGGATGACTGTAAAAGCTGAAAAAATAGTGTTTCCTGGAGGCGGGACTCATTTTCATTATGGAGCTGACAAGTACATAGCATCAATTGCAAATgtatgtctgcatctgattttactggttttgcatataaaaaaatgacaccatatatattttgttttagaattgggagttctatgagattttatgtgtgttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA