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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...taccagtcttgtgttgttatcttgtgaatatttttctctttgcaagaaactaaaaattcaagccatgtgctgcatttaatgtgacaaaactgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCCATGGGAATGTTTGGAGATATATTCAAG

Basic information

species Glycine max
transcript GLYMA20G31760.1
intron # 10
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193529161|gb|FK484352.1|FK484352
EST:     TGAGAGCAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|193543207|gb|FK502470.1|FK502470
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTG
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTG
EST: gi|208267519|gb|GE065154.1|GE065154
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|193710399|gb|FK648655.1|FK648655
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGAT
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGAT
EST: gi|207843151|gb|GD815101.1|GD815101
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|208041438|gb|GD841754.1|GD841754
EST:     TTGAGAGGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: TTGAGA-GGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|208158290|gb|GD956867.1|GD956867
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATA
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATA
EST: gi|193729073|gb|FK665125.1|FK665125
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATNTTGCGGAGAGGTTCTTTGGAGTACAGTGAAGGAACCCC
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|193685340|gb|FK625800.1|FK625800
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTG
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTG
EST: gi|208135113|gb|GD928832.1|GD928832
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATA
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATA
EST: gi|193654022|gb|FK597010.1|FK597010
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATA
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATA
EST: gi|193382184|gb|FK347565.1|FK347565
EST:     TAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: TAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|207821979|gb|GD794334.1|GD794334
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATAT
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATAT
EST: gi|193335196|gb|FK297964.1|FK297964
EST:     AAGCCAAGTATTGTAGTAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: AAGCCAAGTATTG-AG-AGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|193343361|gb|FK307397.1|FK307397
EST:     GAGAGCAAATTTTAAGCCAAGTATTTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: GAGAACAAATTTTAAGCCAAGTA-TTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|193626705|gb|FK575771.1|FK575771
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|193424631|gb|FK390746.1|FK390746
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATAAG                         ATGCTAGATGATATTG
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTG
EST: gi|193431528|gb|FK397358.1|FK397358
EST:     GAGAGCAAATTTTAAGCCAAGTATTTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: GAGAACAAATTTTAAGCCAAGTA-TTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|193419602|gb|FK384008.1|FK384008
EST:     AAGTATTGAGAGGGTTAGTCCTGTCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: AAGTATTGAGAGGG--AG-CCTG-CGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|208274683|gb|GE069687.1|GE069687
EST:     TGAGAGCAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|207697063|gb|GD679942.1|GD679942
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|207800593|gb|GD774590.1|GD774590
EST:     TGAGAACAAATTTTAAGCCAGGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTGGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|208267907|gb|GE068916.1|GE068916
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|208258202|gb|GE055825.1|GE055825
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|193491995|gb|FK456547.1|FK456547
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|193585671|gb|FK541197.1|FK541197
EST:     GAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: GAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|207844412|gb|GD814457.1|GD814457
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATT
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATT
EST: gi|207829566|gb|GD804044.1|GD804044
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGGGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|208202401|gb|GD995714.1|GD995714
EST:     TGAGAGCAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|193697015|gb|FK635315.1|FK635315
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTG
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTG
EST: gi|193583627|gb|FK539303.1|FK539303
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|208195935|gb|GD988126.1|GD988126
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|208054687|gb|GD852738.1|GD852738
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|193346177|gb|FK310565.1|FK310565
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|208298185|gb|GE092406.1|GE092406
EST:     TGAGAACAAATTTTAAGCTAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGC
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGC
EST: gi|207833801|gb|GD807634.1|GD807634
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|207716671|gb|GD698145.1|GD698145
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATA
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATA
EST: gi|193339911|gb|FK306602.1|FK306602
EST:     GAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTG
genomic: GAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTG
EST: gi|207823151|gb|GD794904.1|GD794904
EST:     TGAGAGCAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|207733230|gb|GD710032.1|GD710032
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATA
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATA
EST: gi|207701734|gb|GD681957.1|GD681957
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|208041889|gb|GD841351.1|GD841351
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|193689697|gb|FK632272.1|FK632272
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|193726210|gb|FK656472.1|FK656472
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|207831630|gb|GD802594.1|GD802594
EST:     GAGAACAAATTTTAAGCCAAGTATTGGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTTGGAGTACAGCGAAGGAACCC
genomic: GAGAACAAATTTTAAGCCAAGTATT-GAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTC-TTTGGAGTACAGCGAAGGAACCC
EST: gi|208271397|gb|GE072603.1|GE072603
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATT
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATT
EST: gi|193398377|gb|FK362927.1|FK362927
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|193696236|gb|FK636584.1|FK636584
EST:     TGAGAGCAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|193559225|gb|FK512078.1|FK512078
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGTGAAGGAACCCC
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|193476785|gb|FK440374.1|FK440374
EST:     TGAGAGCAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|193401128|gb|FK370127.1|FK370127
EST:     TGAGAGCAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|208315256|gb|GE113122.1|GE113122
EST:     TGAGAGCAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|193638169|gb|FK586663.1|FK586663
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|208260197|gb|GE057707.1|GE057707
EST:     TGAGAGCAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|193371061|gb|FK337302.1|FK337302
EST:     TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
EST: gi|193669011|gb|FK613599.1|FK613599
EST:     TGAGAGCAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAG                         ATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC
genomic: TGAGAACAAATTTTAAGCCAAGTATTGAGAGGGAGCCTGCGTTCAATGAGgtcagataac ... tgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gaaactaaaaattcaagccatgtgctgcatttaatgtgacaaaactgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCCATGGGAATGTTTGGAGATATATTCAAG
     taaaaattcaa  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
taccagtcttgtgttgttatcttgtgaatatttttctctttgcaagaaactaaaaattcaagccatgtgctgcatttaatgtgacaaaactgtgattcagATGCTAGATGATATTGCGGAGAGGTTCTTTGGAGTACAGCGAAGGAACCCCATGGGAATGTTTGGAGATATATTCAAG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGAT
- - - tcttgtg
- - - - - - - - - - - - - - - - - - - - tgcaaga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - ttcaagc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -catgtgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tgcattt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gacaaaac