1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CTTCCTATTCTTTGGAGATACAACAAAATGAGCATGCTTAATCTTGTGGCAAGCCTGGTGAAGgtatgctgtttctgttaatatgctttacataaagaaataatgtgaaatttatatcctgtccttttgctttggaatgtttttaggagcctttgaatggttc...
species | Glycine max |
transcript | GLYMA20G31000.2 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: GGAGATACAACAAAATGAGCATGCTTAATCTTGTGGCAAGCCTGGTGAAG ACAGGAGTGCATGGAAGAATATATTCTTCAGGCGATGGAAGGCCATTACCAEST: gi|57575392|gb|CX548367.1|CX548367
genomic: GGAGATACAACAAAATGAGCATGCTTAATCTTGTGGCAAGCCTGGTGAAGgtatgctgtt ... tactctctagACAGGAGTGCATGGAAGAATATATTCTTCAGGCGATGGAAGGCCATTACCA
EST: GGAGATACAACAAAATGAGCATGCTTAATCTTGTGGCAAGCCTGGTGAAG ACAGGAGTGCATGGAAGAATATATTCTTCAGGCGATGGAAGGCCATTACCAEST: gi|192301523|gb|FG994763.1|FG994763
genomic: GGAGATACAACAAAATGAGCATGCTTAATCTTGTGGCAAGCCTGGTGAAGgtatgctgtt ... tactctctagACAGGAGTGCATGGAAGAATATATTCTTCAGGCGATGGAAGGCCATTACCA
EST: GGAGATACAACAAAATGAGCATGCTTAATCTTGTGGCAAGCCTGGTGAAG ACAGGAGTGCATGGAAGAATATATTCTTCAGGCGATGGAAGGCCATTACCAEST: gi|207690830|gb|GD672538.1|GD672538
genomic: GGAGATACAACAAAATGAGCATGCTTAATCTTGTGGCAAGCCTGGTGAAGgtatgctgtt ... tactctctagACAGGAGTGCATGGAAGAATATATTCTTCAGGCGATGGAAGGCCATTACCA
EST: GGAGATACAACAAAATGAGCATGCTTAATCTTGTGGCAAGCCTGGTGAAG ACAGGAGTGCATGGAAGAATATATTCTTCAGGCGATGGAAGGCCGTTACCAEST: gi|57575090|gb|CX548065.1|CX548065
genomic: GGAGATACAACAAAATGAGCATGCTTAATCTTGTGGCAAGCCTGGTGAAGgtatgctgtt ... tactctctagACAGGAGTGCATGGAAGAATATATTCTTCAGGCGATGGAAGGCCATTACCA
EST: GGAGATACAACAAAATGAGCATGCTTAATCTTGTGGCAAGCCTGGTGAAG ACAGGAGTGCATGGAAGAATATATTCTTCAGGCGATGGAAGGCCATTACCA
genomic: GGAGATACAACAAAATGAGCATGCTTAATCTTGTGGCAAGCCTGGTGAAGgtatgctgtt ... tactctctagACAGGAGTGCATGGAAGAATATATTCTTCAGGCGATGGAAGGCCATTACCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTTCCTATTCTTTGGAGATACAACAAAATGAGCATGCTTAATCTTGTGGCAAGCCTGGTGAAGgtatgctgtttctgttaatatgctttacataaagaaataatgtgaaatttatatcctgtccttttgctttggaatgtttttaggagcctttgaatggttc
- - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -taaagaaa