1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
TGGAAGGAGGAGACTAGAACTATTTGGTGAAGACCACAATATCCGAGCCGGTTGGCTGACTGTTGGTAAAGAATTGTCATCTTCAAATTTTAATAAAGAGgtatgaaatttgaaatgctagtatacctacatgacatttaaagttgattctttgtatctaccttgtttaatatatgctaatatattctgtatttttttct...
species | Glycine max |
transcript | GLYMA20G30130.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: GTTGGCTGACTGTTGGTAAAGAATTGTCATCTTCAAATTTTAATAAAGAG GCATATGTGAAAAGTTTTEST: gi|7926223|gb|AW832249.1|AW832249
genomic: GTTGGCTGACTGTTGGTAAAGAATTGTCATCTTCAAATTTTAATAAAGAGgtatgaaatt ... ataaattcagGCATATGTGAAAAGTTTT
EST: GTTGGCTGACTGTTGGTAAAGAATTGTCATCTTCAAATTTTAATAAAGAG GCATATGTGAAAAGTTTTGCTGACAAAGATGGGAAAGTTTGGCAAGGAGGTEST: gi|10234239|gb|BE803127.1|BE803127
genomic: GTTGGCTGACTGTTGGTAAAGAATTGTCATCTTCAAATTTTAATAAAGAGgtatgaaatt ... ataaattcagGCATATGTGAAAAGTTTTGCTGACAAAGATGGGAAAGTTTGGCAAGGAGGT
EST: GTTGGCTGACTGTTGGTAAAGAATTGTCATCTTCAAATTTTAATAAAGAG GCATATGTGAAAAGTTTTGCTGACAAAGATGGGAAAGTTTGGCAAGGAGGTEST: gi|24205201|gb|BU964454.1|BU964454
genomic: GTTGGCTGACTGTTGGTAAAGAATTGTCATCTTCAAATTTTAATAAAGAGgtatgaaatt ... ataaattcagGCATATGTGAAAAGTTTTGCTGACAAAGATGGGAAAGTTTGGCAAGGAGGT
EST: GTTGGCTGACTGTTGGTAAAGAATTGTCATCTTCAAATTTTAATAAAGAG GCATATGTGAAAAGTTTTGCTGACAAAGATGGGAAAGTTTGGCAAGGAGGT
genomic: GTTGGCTGACTGTTGGTAAAGAATTGTCATCTTCAAATTTTAATAAAGAGgtatgaaatt ... ataaattcagGCATATGTGAAAAGTTTTGCTGACAAAGATGGGAAAGTTTGGCAAGGAGGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGAAGGAGGAGACTAGAACTATTTGGTGAAGACCACAATATCCGAGCCGGTTGGCTGACTGTTGGTAAAGAATTGTCATCTTCAAATTTTAATAAAGAGgtatgaaatttgaaatgctagtatacctacatgacatttaaagttgattctttgtatctaccttgtttaatatatgctaatatattctgtatttttttct
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