Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTTATGCCATATGGTTCAGAAGTTAGTAAACATATTGAAACAGATGGACCCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcatttttgttcactcccatatcatgtgaacttataaacatattattgaacccattcagacgtatagttttattggagtaaaaagattgaatat...

Basic information

species Glycine max
transcript GLYMA20G30110.2
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA20G30110.2 (Glycine max), 5'ss of exon 3
lower sequence: Vv14s0083g00950.t01 (Vitis vinifera), 5'ss of exon 2
GTTTATGCCATATGGTTCAGAAGTTAGTAAACATATTGAAACAGATGGACCCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcatttttgttcactcccatatcatgtgaacttataaacatattattgaacc-cattcagacgt-----atagttttattggagtaaaaagattgaatat
|||| ||||  ||||| || ||| | || ||||| ||||| ||||||||||| |  |||||||| ||  |||| |||||||| | ||||||||| ||||||||||||  |     |    | | | ||  | | | |  || |   | ||   |   | ||||  | |       | | |  |||| | ||       |||     
GTTTGTGCCGGATGGTGCAAAAGCTTGTGAACATTTTGAAGCAGATGGACCCGAGAGATCCTTTCCGAATTGAGATGACTGACATGCTTTTGGAAAAACTgtaagttgctgagcctcttattctacatttt-ttagccaatcactttgttgaagtttcgcatttcggcacttgaaacattcctattcgtgtttctgatttg-----
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|207823913|gb|GD794588.1|GD794588
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|193611512|gb|FK560804.1|FK560804
EST:     CCAAAGGANCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|207821229|gb|GD792268.1|GD792268
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|193350398|gb|FK317458.1|FK317458
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|208263848|gb|GE065256.1|GE065256
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|192303433|gb|FG997463.1|FG997463
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|193703715|gb|FK634701.1|FK634701
EST:     CTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|58019754|gb|CX706496.1|CX706496
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|208037786|gb|GD834484.1|GD834484
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|208196559|gb|GD989548.1|GD989548
EST:     CCAAAGGATCCCTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTCTGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|193497172|gb|FK462100.1|FK462100
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|208200904|gb|GD997367.1|GD997367
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|207740598|gb|GD714746.1|GD714746
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCA
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCA
EST: gi|193722833|gb|FK657451.1|FK657451
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|207696473|gb|GD678594.1|GD678594
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAGCCAGG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGG
EST: gi|207780295|gb|GD752664.1|GD752664
EST:     ATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: ATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|13477459|gb|BG507339.1|BG507339
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|208101496|gb|GD899037.1|GD899037
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTC
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTC
EST: gi|208035153|gb|GD836393.1|GD836393
EST:     CCAAAGGATCCCTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTCTGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|208232520|gb|GE032273.1|GE032273
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|298174869|gb|HO014786.1|HO014786
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|208333718|gb|GE132027.1|GE132027
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|254317398|gb|GR826343.1|GR826343
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|192303434|gb|FG997464.1|FG997464
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         TTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|6725606|gb|AW310005.1|AW310005
EST:     CCAAGGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACCACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|208125791|gb|GD922025.1|GD922025
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|192303063|gb|FG994181.1|FG994181
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|192303062|gb|FG994180.1|FG994180
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|193710885|gb|FK641786.1|FK641786
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|193601759|gb|FK554788.1|FK554788
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|254315762|gb|GR825571.1|GR825571
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|254315761|gb|GR825570.1|GR825570
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|208067998|gb|GD863622.1|GD863622
EST:     AAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: AAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|208118129|gb|GD920066.1|GD920066
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|193464444|gb|FK430986.1|FK430986
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|193468964|gb|FK433280.1|FK433280
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|193602247|gb|FK556214.1|FK556214
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|298198944|gb|HO042307.1|HO042307
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTGTGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|208178376|gb|GD978329.1|GD978329
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|207685991|gb|GD669911.1|GD669911
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTC
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTC
EST: gi|193529678|gb|FK483973.1|FK483973
EST:     TATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: TATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|208185877|gb|GD985386.1|GD985386
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|207787280|gb|GD758791.1|GD758791
EST:     CCAAAGGATCCCTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAGGCATCA
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCA
EST: gi|208165147|gb|GD965039.1|GD965039
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|207826182|gb|GD799013.1|GD799013
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|208183343|gb|GD984057.1|GD984057
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACC
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACC
EST: gi|58022797|gb|CX709538.1|CX709538
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|208107158|gb|GD902943.1|GD902943
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|208237682|gb|GE032638.1|GE032638
EST:     CCAAAGGATCCCTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTG
EST: gi|58016200|gb|CX702942.1|CX702942
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|208173402|gb|GD971619.1|GD971619
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACG
EST: gi|193601678|gb|FK553517.1|FK553517
EST:     CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACT                         CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTTATGCGAAC
genomic: CCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcat ... tggatgacagCTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACT-ATGCGAAC

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GTTTATGCCATATGGTTCAGAAGTTAGTAAACATATTGAAACAGATGGACCCAAAGGATCCTTTTCGGGTTGATATGACTGATAAGCTTTTGGAGAAACTgtaagttcatttttgttcactcccatatcatgtgaacttataaacatattattgaacccattcagacgtatagttttattggagtaaaaagattgaatat

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGAA