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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TAGACCTCAGAATGAGACATAGGATTAAGGGGGAGAATGGATATCTTGATGGGAAAACATTCACATCAGCCTCAACTTTGAGCAAAACTGTTCGCAACTCgtaagtggaacttagttctattttatatcctcttgcaattgcatttattcgcctgtgatattctgttcttgacacacatttgacactattgacag

Basic information

species Glycine max
transcript GLYMA20G28340.1
intron # 9
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|24136293|gb|BU926803.1|BU926803
EST:     GGGAAAACATTCACATCAGCCTCAACTTTGAGCAAAACTGTTCGCAACTC                         GCTGGACAATGAAACTCATGTATACACAGAGGAAAGTGCTAGGTTCATATA
genomic: GGGAAAACATTCACATCAGCCTCAACTTTGAGCAAAACTGTTCGCAACTCgtaagtggaa ... ctattgacagGCTGGACAATGAAACTCATGTATACACAGAGGAAAGTGCTAGGTTCATATA
EST: gi|18039772|gb|BM308066.1|BM308066
EST:     GGGAAAACATTCACATCAGCCTCAACTTTGAGCAAAACTGTTCGCAACTC                         GCTGGACAATGAAACTCATGTATACACAGAGGAAAGTGCTAGGTTCATATA
genomic: GGGAAAACATTCACATCAGCCTCAACTTTGAGCAAAACTGTTCGCAACTCgtaagtggaa ... ctattgacagGCTGGACAATGAAACTCATGTATACACAGAGGAAAGTGCTAGGTTCATATA