1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
ATGTTGTGCCTTATTCAGCTCACATCCCATCCTATGCTGATATTTGGGGATGGGTTATGgtaaatattactgataattaatttcaagttcttgtttagtattatgtgttatgtatgttaagatatatgtgataagaaaagggggcacaaaaaaaagttg...
species | Glycine max |
transcript | GLYMA20G28340.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: CTTATTCAGCTCACATCCCATCCTATGCTGATATTTGGGGATGGGTTATG GCTTCAGATTCTCCATTAGACCTGAGTGCAGAAGAGCTAGACCTCAGAATGEST: gi|18039772|gb|BM308066.1|BM308066
genomic: CTTATTCAGCTCACATCCCATCCTATGCTGATATTTGGGGATGGGTTATGgtaaatatta ... aatgtaacagGCTTCAGATTCTCCATTAGACCTGAGTGCAGAAGAGCTAGACCTCAGAATG
EST: CTTATTCAGCTCACATCCCATCCTATGCTGATATTTGGGGATGGGTTATG GCTTCAGATTCTCCATTAGACCTGAGTGCAGAAGAGCTAGACCTCAGAATG
genomic: CTTATTCAGCTCACATCCCATCCTATGCTGATATTTGGGGATGGGTTATGgtaaatatta ... aatgtaacagGCTTCAGATTCTCCATTAGACCTGAGTGCAGAAGAGCTAGACCTCAGAATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGTTGTGCCTTATTCAGCTCACATCCCATCCTATGCTGATATTTGGGGATGGGTTATGgtaaatattactgataattaatttcaagttcttgtttagtattatgtgttatgtatgttaagatatatgtgataagaaaagggggcacaaaaaaaagttg
- - - - - - - TCAGCT
- - - - - - - CAGCTC
- - - - - - - - AGCTCA
- - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - GCTGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ataagaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaaaaaaa