1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
ATATGTAGCTGTATTATCTACCCCGACCCTTTGCCAAGAGGAAAGGCTGAAGgtacttctctaatcacatgataacaaatgtcgtctttaccttgatatggtattaattgttaccggaactttacag
species | Glycine max |
transcript | GLYMA20G02950.1 |
intron # | 13 |
splice site | 5' |
intron type | U2 |
EST: ATGTAGCTGTATAATCTACCCCGACCCTTTGCCAAGAGGAAAGGCTGAAG GAGTTACAACTCAAACTAGACCTTTTGAATTCGGAAATACCAGCAAACCATEST: gi|21601739|gb|BQ612070.1|BQ612070
genomic: ATGTAGCTGTATTATCTACCCCGACCCTTTGCCAAGAGGAAAGGCTGAAGgtacttctct ... aactttacagGAGTTACAACTCAAACTAGACCTTTTGAATTCGGAAATACCAGCAAACCAT
EST: ATGTAGCTGTATTATCTACCCCGACCCTTTGCCAAGAGGAAAGGCTGAAG GAGTTACAACTCAAACTAGACCTTTTGAATTCGGAAATACCAGCAAACCATEST: gi|31472042|gb|CD414070.1|CD414070
genomic: ATGTAGCTGTATTATCTACCCCGACCCTTTGCCAAGAGGAAAGGCTGAAGgtacttctct ... aactttacagGAGTTACAACTCAAACTAGACCTTTTGAATTCGGAAATACCAGCAAACCAT
EST: CAAGAGGAAAGGCTGAAG GAGTTACAACTCAAACTAGACCTTTTGAATTCGGAAATACCAGCAAACCATEST: gi|213602617|gb|DB978088.1|DB978088
genomic: CAAGAGGAAAGGCTGAAGgtacttctct ... aactttacagGAGTTACAACTCAAACTAGACCTTTTGAATTCGGAAATACCAGCAAACCAT
EST: ATGTAGCTGTATTATCTACCCCGACCCTTTGCCAAGAGGAAAGGCTGAAG GAGTTACAACTCAAACTAGACCTTTTGAATTCGGAAATACCAGCAAACCATEST: gi|51344791|gb|CO985524.1|CO985524
genomic: ATGTAGCTGTATTATCTACCCCGACCCTTTGCCAAGAGGAAAGGCTGAAGgtacttctct ... aactttacagGAGTTACAACTCAAACTAGACCTTTTGAATTCGGAAATACCAGCAAACCAT
EST: ATGTAGCTGTATTATCTACCCCGACCCTTTGCCAAGAGGAAAGGCTGAAG GAGTTACAACTCAAACTAGACCTTTTGAATTCGGAAATACCAGCAAACCAT
genomic: ATGTAGCTGTATTATCTACCCCGACCCTTTGCCAAGAGGAAAGGCTGAAGgtacttctct ... aactttacagGAGTTACAACTCAAACTAGACCTTTTGAATTCGGAAATACCAGCAAACCAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATATGTAGCTGTATTATCTACCCCGACCCTTTGCCAAGAGGAAAGGCTGAAGgtacttctctaatcacatgataacaaatgtcgtctttaccttgatatggtattaattgttaccggaactttacag
- - - - - - - - - - - - - - - - - AAGAGG
- - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - CTGAAG