Skip to another splice site:
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 5'  3'   		2  
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGTGCCTGGAGCTGAACCTGATAGGTTCAATGGAGCAAAGACTATTAGGGAACTTTATGAAATTGCAAGTGAAAACTATGCCGGAAAGTACACTGTTCCGgtatgaagatacactgtcttctttcttgtttttttttttatttgctttgctgggaagatgtttattgtcaactgatgacttttgatctgcacag

Basic information

species Glycine max
transcript GLYMA20G02490.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|7639431|gb|AW733754.1|AW733754
EST:     AACTTTATGAAATTGCAAGTGAAAACTATGCCGGAAAGTACACTGTTCCG                         GTTCTGTGGGATAAGAAACTCAAGACAATTGTTAACAACGAGAGCTCAGAG
genomic: AACTTTATGAAATTGCAAGTGAAAACTATGCCGGAAAGTACACTGTTCCGgtatgaagat ... atctgcacagGTTCTGTGGGATAAGAAACTCAAGACAATTGTTAACAACGAGAGCTCAGAG
EST: gi|8283063|gb|BE020624.1|BE020624
EST:     AACTTTATGAAATTGCAAGTGAAAACTATGCCGGAAAGTACACTGTTCCG                         GTTCTGTGGGATAAGAAACTCAAGACAATTGTTAACAACGAGAGCTCAGAG
genomic: AACTTTATGAAATTGCAAGTGAAAACTATGCCGGAAAGTACACTGTTCCGgtatgaagat ... atctgcacagGTTCTGTGGGATAAGAAACTCAAGACAATTGTTAACAACGAGAGCTCAGAG
EST: gi|298199221|gb|HO042584.1|HO042584
EST:     AACTTTATGAAATTGCAAGTGAAAACTATGCCGGAAAGTACACTGTTCCG                         GTTCTGTGGGATAAGAAACTCAAGACAATTGTTAACAACGAGAGCTCAGAG
genomic: AACTTTATGAAATTGCAAGTGAAAACTATGCCGGAAAGTACACTGTTCCGgtatgaagat ... atctgcacagGTTCTGTGGGATAAGAAACTCAAGACAATTGTTAACAACGAGAGCTCAGAG
EST: gi|298165802|gb|HO008773.1|HO008773
EST:     AACTTTATGAAATTGCAAGTGAAAACTATGCCGGAAAGTACACTGTTCCG                         GTTCTGTGGGATAAGAAACTCAAGACAATTGTTAACAACGAGAGCTCAGAG
genomic: AACTTTATGAAATTGCAAGTGAAAACTATGCCGGAAAGTACACTGTTCCGgtatgaagat ... atctgcacagGTTCTGTGGGATAAGAAACTCAAGACAATTGTTAACAACGAGAGCTCAGAG
EST: gi|192307448|gb|FK000776.1|FK000776
EST:     AACTTTATGAAATTGCAAGTGAAAACTATGCCGGAAAGTACACTGTTCCG                         GTTCTGTGGGATAAGAAACTCAAG
genomic: AACTTTATGAAATTGCAAGTGAAAACTATGCCGGAAAGTACACTGTTCCGgtatgaagat ... atctgcacagGTTCTGTGGGATAAGAAACTCAAG
EST: gi|7692666|gb|AW760767.1|AW760767
EST:     AACTTTATGAAATTGCAAGTGAAAACTATGCCGGAAAGTACACTGTTCCG                         GTTCTGTGGGATAAGAAACTCAAGACAATTGTTAACAACGAGAGCTCAGAG
genomic: AACTTTATGAAATTGCAAGTGAAAACTATGCCGGAAAGTACACTGTTCCGgtatgaagat ... atctgcacagGTTCTGTGGGATAAGAAACTCAAGACAATTGTTAACAACGAGAGCTCAGAG
EST: gi|209728829|gb|BW655471.1|BW655471
EST:     AACTTTATGAAATTGCAAGTGAAAACTATGCCGGAAAGTACACTGTTCCG                         GTTCTGTGGGATAAGAAACTCAAGACAATTGTTAACAACGAGAGCTCAGAG
genomic: AACTTTATGAAATTGCAAGTGAAAACTATGCCGGAAAGTACACTGTTCCGgtatgaagat ... atctgcacagGTTCTGTGGGATAAGAAACTCAAGACAATTGTTAACAACGAGAGCTCAGAG
EST: gi|192307449|gb|FK000777.1|FK000777
EST:     AACTTTATGAAATTGCAAGTGAAAACTATGCCGGAAAGTACACTGTTCCG                         GTTCTGTGGGATAAGAAACTCAAGACAATTGTTAACAACGAGAGCTCAGAG
genomic: AACTTTATGAAATTGCAAGTGAAAACTATGCCGGAAAGTACACTGTTCCGgtatgaagat ... atctgcacagGTTCTGTGGGATAAGAAACTCAAGACAATTGTTAACAACGAGAGCTCAGAG
EST: gi|9902544|gb|BE611512.1|BE611512
EST:     AACTTTATGAAATTGCAAGTGAAAACTATGCCGGAAAGTACACTGTTCCG                         GTTCTGTGGGATAAGAAACTCAAGACAATTGTTAACAACGAGAGCTCAGAG
genomic: AACTTTATGAAATTGCAAGTGAAAACTATGCCGGAAAGTACACTGTTCCGgtatgaagat ... atctgcacagGTTCTGTGGGATAAGAAACTCAAGACAATTGTTAACAACGAGAGCTCAGAG
EST: gi|120491353|gb|EH219520.1|EH219520
EST:     AACTTTATGAAATTGCAAGTGAAAACTATGCCGGAAAGTACACTGTTCCG                         GTTCTGTGGGATAAGAAACTCAAGACAATTGTTAACAACGAGAGCTCAGAG
genomic: AACTTTATGAAATTGCAAGTGAAAACTATGCCGGAAAGTACACTGTTCCGgtatgaagat ... atctgcacagGTTCTGTGGGATAAGAAACTCAAGACAATTGTTAACAACGAGAGCTCAGAG
EST: gi|213588695|gb|DB957580.1|DB957580
EST:     AACTTTATGAAATTGCAAGTGAAAACTATGCCGGAAAGTACACTGTTCCG                         GTTCTGTGGGATAAGAAACTCAAGACAATTGTTAACAACGAGAGCTCAGAG
genomic: AACTTTATGAAATTGCAAGTGAAAACTATGCCGGAAAGTACACTGTTCCGgtatgaagat ... atctgcacagGTTCTGTGGGATAAGAAACTCAAGACAATTGTTAACAACGAGAGCTCAGAG
EST: gi|151396239|gb|EV266116.1|EV266116
EST:     AACTTTATGAAATTGCAAGTGAAAACTGTGCCGGAAAGTACACTGTTCCG                         GTTCTGTGGGATAAGAAACTCAAGACAATTGTTAACAACGAGAGCTCAGAG
genomic: AACTTTATGAAATTGCAAGTGAAAACTATGCCGGAAAGTACACTGTTCCGgtatgaagat ... atctgcacagGTTCTGTGGGATAAGAAACTCAAGACAATTGTTAACAACGAGAGCTCAGAG
EST: gi|151404135|gb|EV273945.1|EV273945
EST:     AACTTTATGAAATTGCAAGTGAAAACTATGCCGGAAAGTACACTGTTCCG                         GTTCTGTGGGATAAGAAACTCAAGACAATTGTTAACAACGAGAGCTCAGAG
genomic: AACTTTATGAAATTGCAAGTGAAAACTATGCCGGAAAGTACACTGTTCCGgtatgaagat ... atctgcacagGTTCTGTGGGATAAGAAACTCAAGACAATTGTTAACAACGAGAGCTCAGAG
EST: gi|298163642|gb|HO012375.1|HO012375
EST:     AACTTTATGAAATTGCAAGTGAAAACTATGCCGGAAAGTACACTGTTCCG                         GTTCTGTGGGATAAGAAACTCAAGACAATTGTTAACAACGAGAGCTCAGAG
genomic: AACTTTATGAAATTGCAAGTGAAAACTATGCCGGAAAGTACACTGTTCCGgtatgaagat ... atctgcacagGTTCTGTGGGATAAGAAACTCAAGACAATTGTTAACAACGAGAGCTCAGAG
EST: gi|15201916|gb|BI425126.1|BI425126
EST:     AACTTTATGAAATTGCAAGTGAAAACTATGCCGGAAAGTACACTGTTCCG                         GTTCTGTGGGATAAGAAACTCAAGACAATTGTTAACAACGAGAGCTCAGAG
genomic: AACTTTATGAAATTGCAAGTGAAAACTATGCCGGAAAGTACACTGTTCCGgtatgaagat ... atctgcacagGTTCTGTGGGATAAGAAACTCAAGACAATTGTTAACAACGAGAGCTCAGAG