1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
ACGTATGTTTCTTTTGCAGGAAGTGAACAAGATTAGTGCTTATACACAGACAAGAGCTGATCCAAAGGAAATCGTTGATCTTTTCAAGAAACGTTTTTTGgtactgtaaacaacattcacatacctcacaagattgagtttgcatgattgtcattgatttctgcaattctacgtattctctttgccactatgttgaacttctacacttttactttgcag
species | Glycine max |
transcript | GLYMA19G36080.2 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: AAATCGTTGATC-TTTCAAGAAACGTTTTTTG GCTCAACAGTGAAAATTTGGTTGCAGTGGGTATCCTCTAAGTTGTAGATTGEST: gi|208338492|gb|GE135678.1|GE135678
genomic: AAATCGTTGATCTTTTCAAGAAACGTTTTTTGgtactgtaaa ... tactttgcagGCTCAACAGTGAAAATTTGGTTGCAGTGGGTATCCTCTAAGTTGTAGATTG
EST: AAATCGTTGATCTTTTTCAAGAAACGTTTTTTG GCTCAACAGTGAAAATTTGGTTGCAGTGGGTATCCTCTAAGTTGTAGATTG
genomic: AAATCGTTGATC-TTTTCAAGAAACGTTTTTTGgtactgtaaa ... tactttgcagGCTCAACAGTGAAAATTTGGTTGCAGTGGGTATCCTCTAAGTTGTAGATTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACGTATGTTTCTTTTGCAGGAAGTGAACAAGATTAGTGCTTATACACAGACAAGAGCTGATCCAAAGGAAATCGTTGATCTTTTCAAGAAACGTTTTTTGgtactgtaaacaacattcacatacctcacaagattgagtttgcatgattgtcattgatttctgcaattctacgtattctctttgccactatgttgaacttctacacttttactttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA