1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CTAAGATTTGGGGGAAATAACACTCAAGCCTTGGGTTACAGCATTTGGAAAGGGCCTGTAAAGCCACAAGCCTTATTTGTTGATGAAAATGCGTGCATAGgtactctttactgaaaatttcctcatttttcatcaaatattaattaaatccatgcttccacagttcctttgaagagtatagcaaaaaagatattcgtaaa...
species | Glycine max |
transcript | GLYMA19G13280.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: AGGGCCTGTAAAGCCACAAGCCTTATTTGTTGATGAAAATGCGTGCATAG GTTGCAGAGAATGTGTGCATCATGCAAGTCATACATTCACNCATGGATGAAEST: gi|51337063|gb|CO980929.1|CO980929
genomic: AGGGCCTGTAAAGCCACAAGCCTTATTTGTTGATGAAAATGCGTGCATAGgtactcttta ... ttgttaccagGTTGCAGAGAATGTGTGCATCATGCAAGTCATACATTCAC-CATGGATGAA
EST: GGGCCTGTAAAGCCACAAGCCTTATTTGTTGATGAAAATGCGTGCATAG GTTGCAGAGAATGTGTGCATCATGCAAGTCATACATTCACCATGGATGAAAEST: gi|151398403|gb|EV268274.1|EV268274
genomic: GGGCCTGTAAAGCCACAAGCCTTATTTGTTGATGAAAATGCGTGCATAGgtactcttta ... ttgttaccagGTTGCAGAGAATGTGTGCATCATGCAAGTCATACATTCACCATGGATGAAA
EST: AGGGCCTGTAAAGCCACAAGCCTTATTTGTTGATGAAAATGCGTGCATAG GTTGCAGAGAATGTGTGCATCATGCAAGTCATACATTCACCATGGATGAAA
genomic: AGGGCCTGTAAAGCCACAAGCCTTATTTGTTGATGAAAATGCGTGCATAGgtactcttta ... ttgttaccagGTTGCAGAGAATGTGTGCATCATGCAAGTCATACATTCACCATGGATGAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTAAGATTTGGGGGAAATAACACTCAAGCCTTGGGTTACAGCATTTGGAAAGGGCCTGTAAAGCCACAAGCCTTATTTGTTGATGAAAATGCGTGCATAGgtactctttactgaaaatttcctcatttttcatcaaatattaattaaatccatgcttccacagttcctttgaagagtatagcaaaaaagatattcgtaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gcaaaaaa