1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
TATTTCCAACTTACTGATAAACCAAATTGATGCCCTACTGCCTACGGGTCCACAAGGGCAAACACGAAGAAGAATAGgtttgtctcaaatctgtgacaaatatatttgtctttcatttgaaacattatcacctcttttacttaagcttatacatttagcattcatccataaaataaa...
species | Glycine max |
transcript | GLYMA19G08050.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TGATGCCCTACTGCCTACGGGTCCACAAGGGCAAACACGAAGAAGAATAG GAAAAGEST: gi|6455745|gb|AW186428.1|AW186428
genomic: TGATGCCCTACTGCCTACGGGTCCACAAGGGCAAACACGAAGAAGAATAGgtttgtctca ... tcttttccagGAAAAG
EST: TGATGCCCTACTGCCTACGGGTCCACAAGGGCAAACACGAAGAAGAATAG G--AA-EST: gi|151403633|gb|EV273443.1|EV273443
genomic: TGATGCCCTACTGCCTACGGGTCCACAAGGGCAAACACGAAGAAGAATAGgtttgtctca ... tcttttccagGAAAAG
EST: TGATGCCCTACTGCCTACGGGTCCACAAGGGCAAACACGAAGAAGAATAG GAAAAGEST: gi|207822826|gb|GD793627.1|GD793627
genomic: TGATGCCCTACTGCCTACGGGTCCACAAGGGCAAACACGAAGAAGAATAGgtttgtctca ... tcttttccagGAAAAG
EST: TGATGCCCTACTGCCTACGGGTCCACAAGGGCAAACACGAAGAAGAATAG GAAAAG
genomic: TGATGCCCTACTGCCTACGGGTCCACAAGGGCAAACACGAAGAAGAATAGgtttgtctca ... tcttttccagGAAAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TATTTCCAACTTACTGATAAACCAAATTGATGCCCTACTGCCTACGGGTCCACAAGGGCAAACACGAAGAAGAATAGgtttgtctcaaatctgtgacaaatatatttgtctttcatttgaaacattatcacctcttttacttaagcttatacatttagcattcatccataaaataaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG