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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGTTACACTGAAACGTTGGACAAGAAGTCTGAAATTGTGGTCCCTGACGATGATCACGGCCTCTATGCGATCGATATTTTGGATCCGTCATGggtaattaaccaatcttaaggggttatgcttatagttaatttttttgttttttgtaagcattgtttgtttatttatttggttttcttgtgcttaagtgtttctgttatgttgtgtggca

Basic information

species Glycine max
transcript GLYMA18G47970.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|7691105|gb|AW759238.1|AW759238
EST:     CCTGACGATGATCACGGCCTCTATGCGATCGATATTTTGGATCCGTCATG                         GTTTACCAAGTGTATACATTTGACGGAGGTGTATCATTTTCATGACATGAT
genomic: CCTGACGATGATCACGGCCTCTATGCGATCGATATTTTGGATCCGTCATGggtaattaac ... ttgtgtggcaGTTTACCAAGTGTATACATTTGACGGAGGTGTATCATTTTCATGACATGAT
EST: gi|298183123|gb|HO028386.1|HO028386
EST:     CCTGACGATGATCACGGCCTCTATGCGATCGATATTTTGGATCCGTCATG                         GTTTACCAAGTGTATACATTTGACGGAGGAGTATCATTTTCATGACATGAT
genomic: CCTGACGATGATCACGGCCTCTATGCGATCGATATTTTGGATCCGTCATGggtaattaac ... ttgtgtggcaGTTTACCAAGTGTATACATTTGACGGAGGTGTATCATTTTCATGACATGAT
EST: gi|7284783|gb|AW597208.1|AW597208
EST:     CCTGACGATGATCACGGCCTCTATGCGATCGATATTTTGGATCCGTCATG                         GTTTACCAAGTGTATACATTTGACGGAGGTGTATCATTTTCATGACATGAT
genomic: CCTGACGATGATCACGGCCTCTATGCGATCGATATTTTGGATCCGTCATGggtaattaac ... ttgtgtggcaGTTTACCAAGTGTATACATTTGACGGAGGTGTATCATTTTCATGACATGAT