Skip to another splice site:
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 5'  3'   		2  
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGTTGCTTGAGTATCACCTTCTTACTCTGGTGTGTCACATTTTGATACTGTTGCTCGCAGTTCTGTTCTTGTGGTCCAATGCCCATACTTTCATCCACAAgtaagcctctaaaacttcgtagtttgttgaacagagaggtagtatagtgtgttttggggtttggcttatctaaccttttgcgaggaatgccaaattatgttgcag

Basic information

species Glycine max
transcript GLYMA18G47420.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208031956|gb|GD829896.1|GD829896
EST:     TTGCTCGCAGTTCTGTTCTTGTGGTCCAATGCCCATACTTTCATCCACAA                         ATCTCCACCTCGCATTCCGGAATTTCATCTTCCAGAGGAGCC
genomic: TTGCTCGCAGTTCTGTTCTTGTGGTCCAATGCCCATACTTTCATCCACAAgtaagcctct ... tatgttgcagATCTCCACCTCGCATTCCGGAATTTCATCTTCCAGAGGAGCC
EST: gi|298179899|gb|HO025114.1|HO025114
EST:     TTGCTCGCAGTTCTGTTCTTGTGGTCCAATGCCCATACTTTCATCCACAA                         ATCTCCACCTCGCATTCCGGAATTTCATCTTCCAGAGGAGCCATTCCTGCA
genomic: TTGCTCGCAGTTCTGTTCTTGTGGTCCAATGCCCATACTTTCATCCACAAgtaagcctct ... tatgttgcagATCTCCACCTCGCATTCCGGAATTTCATCTTCCAGAGGAGCCATTCCTGCA
EST: gi|17963423|gb|BM270172.1|BM270172
EST:     TTGCTCGCAGTTCTGTTCTTGTGGTCCAATGCCCATACTTTCATCCACAA                         ATCTCCACCTCGCATTCCGGAATTTCATCTTCCAGAGGAGCCATTCCTGCA
genomic: TTGCTCGCAGTTCTGTTCTTGTGGTCCAATGCCCATACTTTCATCCACAAgtaagcctct ... tatgttgcagATCTCCACCTCGCATTCCGGAATTTCATCTTCCAGAGGAGCCATTCCTGCA
EST: gi|21256005|gb|BQ452893.1|BQ452893
EST:     TTGCTCGCAGTTCTGTTCTTGTGGTCCAATGCCCATACTTTCATCCACAA                         ATCTCCACCTCGCATTCCGGAATTTCATCTTTTTTAGGAGCCATTCCTGCA
genomic: TTGCTCGCAGTTCTGTTCTTGTGGTCCAATGCCCATACTTTCATCCACAAgtaagcctct ... tatgttgcagATCTCCACCTCGCATTCCGGAATTTCATCTTCCAGAGGAGCCATTCCTGCA
EST: gi|208315190|gb|GE112664.1|GE112664
EST:     TTGCTCGCAGTTCTGTTCTTGTGGTCCAATGCCCATACTTTCATCCACAA                         ATCTCCACCTCGCATTCCGG
genomic: TTGCTCGCAGTTCTGTTCTTGTGGTCCAATGCCCATACTTTCATCCACAAgtaagcctct ... tatgttgcagATCTCCACCTCGCATTCCGG
EST: gi|298176130|gb|HO015535.1|HO015535
EST:     TTGCTCGCAGTTCTGTTCTTGTGGTCCAATGCCCATACTTTCATCCACAA                         ATCTCCACCTCGCATTCCGGAATTTCATCTTCCAGAGGAGCCATTCCTGCA
genomic: TTGCTCGCAGTTCTGTTCTTGTGGTCCAATGCCCATACTTTCATCCACAAgtaagcctct ... tatgttgcagATCTCCACCTCGCATTCCGGAATTTCATCTTCCAGAGGAGCCATTCCTGCA
EST: gi|298177074|gb|HO023435.1|HO023435
EST:     TTGCTCGCAGTTCTGTTCTTGTGGTCCAATGCCCATACTTTCATCCACAA                         ATCTCCACCTCGCATTCCGGAATTTCATCTTCCAGAGGAGCCATTCCTGCA
genomic: TTGCTCGCAGTTCTGTTCTTGTGGTCCAATGCCCATACTTTCATCCACAAgtaagcctct ... tatgttgcagATCTCCACCTCGCATTCCGGAATTTCATCTTCCAGAGGAGCCATTCCTGCA
EST: gi|23057429|gb|BU578103.1|BU578103
EST:     TTGCTCGCAGTTCTGTTCTTGTGGTCCAATGCCCATACTTTCATCCACAA                         ATCTCCACCTCGCATTCCGGAATTTCATCTTCCAGAGGAGCCATTCCTGCA
genomic: TTGCTCGCAGTTCTGTTCTTGTGGTCCAATGCCCATACTTTCATCCACAAgtaagcctct ... tatgttgcagATCTCCACCTCGCATTCCGGAATTTCATCTTCCAGAGGAGCCATTCCTGCA
EST: gi|298169425|gb|HO020785.1|HO020785
EST:     TTGCTCGCAGTTCTGTTCTTGTGGTCCAATGCCCATACTTTCATCCACAA                         ATCTCCACCTCGCATTCCGGAATTTCATCTTCCAGAGGAGCCATTCCTGCA
genomic: TTGCTCGCAGTTCTGTTCTTGTGGTCCAATGCCCATACTTTCATCCACAAgtaagcctct ... tatgttgcagATCTCCACCTCGCATTCCGGAATTTCATCTTCCAGAGGAGCCATTCCTGCA
EST: gi|7926301|gb|AW832327.1|AW832327
EST:     TTGCTCGCAGTTCTGTTCTTGTGGTCCAATGCCCATACTTTCATCCACAA                         ATCTCCACCTCGCATTCCGGAATTTCATCTTCCAGAGGAGCCATTCCTGCA
genomic: TTGCTCGCAGTTCTGTTCTTGTGGTCCAATGCCCATACTTTCATCCACAAgtaagcctct ... tatgttgcagATCTCCACCTCGCATTCCGGAATTTCATCTTCCAGAGGAGCCATTCCTGCA
EST: gi|11687897|gb|BF595573.1|BF595573
EST:     TTGCTCGCAGTTCTGTTCTTGTGGTCCAATGCCCATACTTTCATGCACAA                         ATCTCCAGCTCGCATTCCGGAATTTCATCTTGCAGAGGAGCCATTCCTGCA
genomic: TTGCTCGCAGTTCTGTTCTTGTGGTCCAATGCCCATACTTTCATCCACAAgtaagcctct ... tatgttgcagATCTCCACCTCGCATTCCGGAATTTCATCTTCCAGAGGAGCCATTCCTGCA
EST: gi|298180408|gb|HO021961.1|HO021961
EST:     TTGCTCGCAGTTCTGTTCTTGTGGTCCAATGCCCATACTTTCATCCACAA                         ATCTCCACCTCGCATTCCGGAATTTCATCTTCCAGAGGAGCCATTCCTGCA
genomic: TTGCTCGCAGTTCTGTTCTTGTGGTCCAATGCCCATACTTTCATCCACAAgtaagcctct ... tatgttgcagATCTCCACCTCGCATTCCGGAATTTCATCTTCCAGAGGAGCCATTCCTGCA