1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
taatgaaaatgctttctccacctatttttgctgctatttgtttctttatttgagatttgatgcatgagaagaaaaagaggacctttagttatttgaggttcaatattagaCAGCTAAGGAGAATTTCGAGCTTGCTTTGGAAGCTGATAATACCAATACCCATGCTAGGTATTGGTTGTCCAGATTGCATATGAAATACCCTGTTCCAGG
species | Glycine max |
transcript | GLYMA18G47180.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: CATCGATTATTCCGATCCCAAGCATTCGGGCATTGTTTCTCTTCTCAGGA CAGCTAAGGAGAATTTCGAGCTTGCTTTGGAAGCTGATAATACCAATACCCEST: gi|298182917|gb|HO028130.1|HO028130
genomic: CATCGATTATTCCGATCCCAAGCATTCGGGCATTGTTTCTCTTCTCAGGGtaatgaaaat ... caatattagaCAGCTAAGGAGAATTTCGAGCTTGCTTTGGAAGCTGATAATACCAATACCC
EST: CATCGATTATTCCGATCCCAAGCATTCGGGCATTGTTTCTCTTCTCA--G --GCTAAGGAGAATTTCGAGCTTGCTTTGGAAGCTGATAATACCAATACCCEST: gi|10235578|gb|BE804466.1|BE804466
genomic: CATCGATTATTCCGATCCCAAGCATTCGGGCATTGTTTCTCTTCTCAGGGtaatgaaaat ... caatattagaCAGCTAAGGAGAATTTCGAGCTTGCTTTGGAAGCTGATAATACCAATACCC
EST: CATCGATTATTCCGATCCCAAGCATTCGGGCATTGTTTCTCTTCTCAGGA CAGCTAAGGAGA
genomic: CATCGATTATTCCGATCCCAAGCATTCGGGCATTGTTTCTCTTCTCAGGGtaatgaaaat ... caatattagaCAGCTAAGGAGA
tttgatgcatgagaagaaaaagaggacctttagttatttgaggttcaatattagaCAGCTAAGGAGAATTTCGAGCTTGCTTTGGAAGCTGATAATACCAATACCCATGCTAGGTATTGGTTGTCCAGATTGCATATGAAATACCCTGTTCCAGG
atttgat putative branch site (score: 5)
tttagttattt TA-rich tract