1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
AAAGTGGCCGCAGATAATAATCATAAATGGGTTTACAGTGACACTCAAAATGGGTGTGAATCTAGCTACATTGGTGCATGGAATGCTTCAATGGATCATGtaagggaagtagctaacaataagtgcaaaaaaaaaaacacttggtttatatttttagttttataacttgacatttaatcttgacagc
species | Glycine max |
transcript | GLYMA17G35710.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TGGGTGTGAATCTAGCTACATTGGTGCATGGAATGCTTCAATGGATCATC AACCAAAGACATGGGAGTTTCAGEST: gi|20812787|gb|BQ297265.1|BQ297265
genomic: TGGGTGTGAATCTAGCTACATTGGTGCATGGAATGCTTCAATGGATCATGtaagggaagt ... tcttgacagcAACCAAAGACATGGGAGTTTCAG
EST: TGGGTGTGAATCTAGCTACATTGGTGCATGGAATGCTTCAATGGATCATC AACCAAAGACATGGGAGTTTCAGTTAAATTCAGGTATTCAGAEST: gi|18734745|gb|BM528362.1|BM528362
genomic: TGGGTGTGAATCTAGCTACATTGGTGCATGGAATGCTTCAATGGATCATGtaagggaagt ... tcttgacagcAACCAAAGACATGGGAGTTTCAGTTAAATTCAGGTATTCAGG
EST: TGGGTGTGAATCTAGCTACATTGGTGCATGGAATGCTTCAATGGATCATC AACCAAAGACATGGGAGTTTCAGTTAAATTCAGGTATTCAGAEST: gi|27427471|gb|CA938991.1|CA938991
genomic: TGGGTGTGAATCTAGCTACATTGGTGCATGGAATGCTTCAATGGATCATGtaagggaagt ... tcttgacagcAACCAAAGACATGGGAGTTTCAGTTAAATTCAGGTATTCAGG
EST: CTACATTGGTGCATGGAATGCTTCAATGGATCATC AACCAAAGACATGGGAGTTTCAGTTAAATTCAGGTATTCAGA
genomic: CTACATTGGTGCATGGAATGCTTCAATGGATCATGtaagggaagt ... tcttgacagcAACCAAAGACATGGGAGTTTCAGTTAAATTCAGGTATTCAGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAAGTGGCCGCAGATAATAATCATAAATGGGTTTACAGTGACACTCAAAATGGGTGTGAATCTAGCTACATTGGTGCATGGAATGCTTCAATGGATCATGtaagggaagtagctaacaataagtgcaaaaaaaaaaacacttggtttatatttttagttttataacttgacatttaatcttgacagc
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