1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
CGTCGAATTTCTGGAACCCTCGCCTCAATCGAAGCTCGTCATCGGCTTTGACTGCGAGGGCGTTGACTTGTGCCGCAAAGGCACTCTCTGCGTAATGCAGgtccattcattctctcgtgttagatttcggtttataatttatataattatgtatgtattatatgctgaaattgtaatgttatatgttaatgtaaggaact...
species | Glycine max |
transcript | GLYMA17G34990.2 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: ACTGCGAGGGCGTTGACTTGTGCCGCAAAGGCACTCTCTGCGTAATGCAG CTTGCGTTTCCGGATGCTGTGTACTTGGTTGATGCGATTGAAGGGGGAGAGEST: gi|15663150|gb|BI700521.1|BI700521
genomic: ACTGCGAGGGCGTTGACTTGTGCCGCAAAGGCACTCTCTGCGTAATGCAGgtccattcat ... gttactgcagCTTGCGTTTCCGGATGCTGTCTACTTGGTTGATGCGATTGAAGGGGGAGAG
EST: ACTGCGAGGGCGTTGACTTGTGCCGCAAAGGCACTCTCTGCGTAATGCAG CTTGCGTTTCCGGATGCTGTGTACTTGGT-GAAGGCCGATTGAAGGGGGAGEST: gi|254339165|gb|GR847882.1|GR847882
genomic: ACTGCGAGGGCGTTGACTTGTGCCGCAAAGGCACTCTCTGCGTAATGCAGgtccattcat ... gttactgcagCTTGCGTTTCCGGATGCTGTCTACTTGGTTGATG-C-GATTGAAGGGGGAG
EST: ACTGCGAGGGCGTTGACTTGTGCCGCAAAGGCACTCTCTGCGTAATGCAG CTTGCGTTTCCGGATGCTGTCGGGGTGGTTGATGCGATTGAAGGGGGAGAGEST: gi|20498112|gb|BQ273042.1|BQ273042
genomic: ACTGCGAGGGCGTTGACTTGTGCCGCAAAGGCACTCTCTGCGTAATGCAGgtccattcat ... gttactgcagCTTGCGTTTCCGGATGCTGTCTACTTGGTTGATGCGATTGAAGGGGGAGAG
EST: ACTGCGAGGGCGTTGACTTGTGCCGCAAAGGCACTCTCTGCGTAATGCAG CTTGCGTTTCCGGATGCTGTGTACTTGGTTGATGCGATTGAAGGGGGAGAGEST: gi|193589272|gb|FK543680.1|FK543680
genomic: ACTGCGAGGGCGTTGACTTGTGCCGCAAAGGCACTCTCTGCGTAATGCAGgtccattcat ... gttactgcagCTTGCGTTTCCGGATGCTGTCTACTTGGTTGATGCGATTGAAGGGGGAGAG
EST: ACTGCGAGGGCGTTGACTTGTGCCGCAAAGGCACTCTCTGCGTAATGCAG CTTGCGTTTCCGGATGCTGTCTACTTGGTTGATGCGATTGAAGGGGGAGAGEST: gi|18040715|gb|BM309009.1|BM309009
genomic: ACTGCGAGGGCGTTGACTTGTGCCGCAAAGGCACTCTCTGCGTAATGCAGgtccattcat ... gttactgcagCTTGCGTTTCCGGATGCTGTCTACTTGGTTGATGCGATTGAAGGGGGAGAG
EST: ACTGCGAGGGCGTTGACTTGTGCCGCAAAGGCACTCTCTGCGTAATGCAG CTTGCGTTTCCGGATGCTGTCTACTTGGTTGATGCGATTGAAGGGGGAGAGEST: gi|298193107|gb|HO033541.1|HO033541
genomic: ACTGCGAGGGCGTTGACTTGTGCCGCAAAGGCACTCTCTGCGTAATGCAGgtccattcat ... gttactgcagCTTGCGTTTCCGGATGCTGTCTACTTGGTTGATGCGATTGAAGGGGGAGAG
EST: ACTGCGAGGGCGTTGACTTGTGCCGCAAAGGCACTCTCTGCGTAATGCAG CTTGCGTTTCCGGATGCTGTGTACTTGGTTGATGCGATTGAAGGGGGAGAGEST: gi|192296230|gb|FG991556.1|FG991556
genomic: ACTGCGAGGGCGTTGACTTGTGCCGCAAAGGCACTCTCTGCGTAATGCAGgtccattcat ... gttactgcagCTTGCGTTTCCGGATGCTGTCTACTTGGTTGATGCGATTGAAGGGGGAGAG
EST: ACTGCGAGGGCGTTGACTTGTGCCGCAAAGGCACTCTCTGCGTAATGCAG CTTGCGTTTCCGGATGCTGTCTACCTGGTTGATGCGATTGAAGGGGGAGAGEST: gi|209709559|gb|BW661886.1|BW661886
genomic: ACTGCGAGGGCGTTGACTTGTGCCGCAAAGGCACTCTCTGCGTAATGCAGgtccattcat ... gttactgcagCTTGCGTTTCCGGATGCTGTCTACTTGGTTGATGCGATTGAAGGGGGAGAG
EST: ACTGCGAGGGCGTTGACTTGTGCCGCAAAGGCACTCTCTGCGTAATGCAG CTTGCGTTTCCGGATGCTGTGTACTTGGTTGATGCGATTGAAGGGGGAGAGEST: gi|298194665|gb|HO043137.1|HO043137
genomic: ACTGCGAGGGCGTTGACTTGTGCCGCAAAGGCACTCTCTGCGTAATGCAGgtccattcat ... gttactgcagCTTGCGTTTCCGGATGCTGTCTACTTGGTTGATGCGATTGAAGGGGGAGAG
EST: ACTGCGAGGGCGTTGACTTGTGCCGCAAAGGCACTCTCTGCGTAATGCAG CTTGCGTTTCCGGATGCTGTGTACTTGGTTGATGCGATTGAAGGGGGAGAGEST: gi|254336075|gb|GR841400.1|GR841400
genomic: ACTGCGAGGGCGTTGACTTGTGCCGCAAAGGCACTCTCTGCGTAATGCAGgtccattcat ... gttactgcagCTTGCGTTTCCGGATGCTGTCTACTTGGTTGATGCGATTGAAGGGGGAGAG
EST: ACTGCGAGGGCGTTGACTTGTGCCGCAAAGGCACTCTCTGCGTAATGCAG CTTGCGTTTCCGGATGCTGTCTACTTGGTTGATGCGATTGAAGGGGGAGAG
genomic: ACTGCGAGGGCGTTGACTTGTGCCGCAAAGGCACTCTCTGCGTAATGCAGgtccattcat ... gttactgcagCTTGCGTTTCCGGATGCTGTCTACTTGGTTGATGCGATTGAAGGGGGAGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGTCGAATTTCTGGAACCCTCGCCTCAATCGAAGCTCGTCATCGGCTTTGACTGCGAGGGCGTTGACTTGTGCCGCAAAGGCACTCTCTGCGTAATGCAGgtccattcattctctcgtgttagatttcggtttataatttatataattatgtatgtattatatgctgaaattgtaatgttatatgttaatgtaaggaact
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