Skip to another splice site:
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 5'  3'   		2  
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGCTCAGTTGTGTATTCACGTTCTGCACGAAGGAAAAACCCTAGCTAGTCCACTCCCCCTTCCTCCGTTCGATCAACAATGgtaccatctttgtctttctcttttcccttccaagtcaatttcgattcactgctgaattttctttcttgtgttcgcgtttgtgcaaaaaatgcag

Basic information

species Glycine max
transcript GLYMA17G12430.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298182539|gb|HO031274.1|HO031274
EST:     GGAAAAACCCTAGCTAGTCCTCTCCCCCTTCCTCCGTTCGATCTACAATG                         ACAGGAGAAGCAGTGAACCCCAAAGCTTACCCTTTGGGCGGATGCCCAACT
genomic: GGAAAAACCCTAGCTAGTCCACTCCCCCTTCCTCCGTTCGATCAACAATGgtaccatctt ... aaaaatgcagACAGGAGAAGCAGTGAACCCCAAAGCTTACCCTTT-GGCGGATGCCCAACT
EST: gi|298180380|gb|HO025581.1|HO025581
EST:     GGAAAAACCCTAGCTAGTCCANNNNNNNTTCCTCCGTTCGATCAACAATG                         ACAGGAGAAGCAGTGAACCCCAAAGCTTACCCTTTGGCGGATGCCCAACTC
genomic: GGAAAAACCCTAGCTAGTCCACTCCCCCTTCCTCCGTTCGATCAACAATGgtaccatctt ... aaaaatgcagACAGGAGAAGCAGTGAACCCCAAAGCTTACCCTTTGGCGGATGCCCAACTC
EST: gi|208173600|gb|GD970263.1|GD970263
EST:     GGAAAAACCCTAGCTAGTCCACTCCCCCTTCCTCCGTTCGATCAACAATG                         ACAGGAGAAGCAGTGAACCCCAAAGCTTACCCTTTGGCGGATGCCCAACTC
genomic: GGAAAAACCCTAGCTAGTCCACTCCCCCTTCCTCCGTTCGATCAACAATGgtaccatctt ... aaaaatgcagACAGGAGAAGCAGTGAACCCCAAAGCTTACCCTTTGGCGGATGCCCAACTC
EST: gi|298185053|gb|HO030266.1|HO030266
EST:     GGAAAAACCCTAGCTAGTCCTCTCCCCCTTCCTCCGTTCGATCTACAATG                         ACAGGAGAAGCAGTGAACCCCAAAGCTTACCCTTTGGGCGGATGCCCAACT
genomic: GGAAAAACCCTAGCTAGTCCACTCCCCCTTCCTCCGTTCGATCAACAATGgtaccatctt ... aaaaatgcagACAGGAGAAGCAGTGAACCCCAAAGCTTACCCTTT-GGCGGATGCCCAACT
EST: gi|298171220|gb|HO016252.1|HO016252
EST:     GGAAAAACCCTAGCTAGTCCACTCCCCCTTCCTCCGTTCGATCAACAATG                         ACAGGAGAAGCAGTGAACCCCAAAGCTTACCCTTTGGGCGGATGCCCAACT
genomic: GGAAAAACCCTAGCTAGTCCACTCCCCCTTCCTCCGTTCGATCAACAATGgtaccatctt ... aaaaatgcagACAGGAGAAGCAGTGAACCCCAAAGCTTACCCTTT-GGCGGATGCCCAACT
EST: gi|298195944|gb|HO044335.1|HO044335
EST:     GGAAAAACCCTAGCTAGTCCACTCCCCCTTCCTCCGTTCGATCAACAATG                         ACAGGAGAAGCAGTGAACCCCAAAGCTTACCCTTTGGCGGATGCCCAACTC
genomic: GGAAAAACCCTAGCTAGTCCACTCCCCCTTCCTCCGTTCGATCAACAATGgtaccatctt ... aaaaatgcagACAGGAGAAGCAGTGAACCCCAAAGCTTACCCTTTGGCGGATGCCCAACTC
EST: gi|6566245|gb|AW233926.1|AW233926
EST:     GGAAAAACCCTAGCTAGTCCACTCCCCCTTCCTCCGTTCGATCAACAATG                         ACAGGAGAAGCAGTGAACCCCAAAGCTTACCCTTTGGCGGATGCCCAACTC
genomic: GGAAAAACCCTAGCTAGTCCACTCCCCCTTCCTCCGTTCGATCAACAATGgtaccatctt ... aaaaatgcagACAGGAGAAGCAGTGAACCCCAAAGCTTACCCTTTGGCGGATGCCCAACTC
EST: gi|26059372|gb|CA802286.1|CA802286
EST:     TCCGTTCGATCAACAATG                         ACAGGAGAAGCAGTGAACCCCAAAGCTTACCCTTTGGCGGATGCCCAACTC
genomic: TCCGTTCGATCAACAATGgtaccatctt ... aaaaatgcagACAGGAGAAGCAGTGAACCCCAAAGCTTACCCTTTGGCGGATGCCCAACTC
EST: gi|298189335|gb|HO037738.1|HO037738
EST:     GGAAAAACCCTAGCTAGTCCACTCCCCCTTCCTCCGTTCGATCAACAATG                         ACAGGAGAAGCAGTGAACCCCAAAGCTTACCCTTTGGCGGATGCCCAACTC
genomic: GGAAAAACCCTAGCTAGTCCACTCCCCCTTCCTCCGTTCGATCAACAATGgtaccatctt ... aaaaatgcagACAGGAGAAGCAGTGAACCCCAAAGCTTACCCTTTGGCGGATGCCCAACTC
EST: gi|18039291|gb|BM307585.1|BM307585
EST:     GAAAAACCCTAGCTAGTCCACTCCCCCTTCCTCCGTTCGATCAACAATG                         ACAGGAGAAGCAGTGAACCCCAAAGCTTACCCTTTGGCGGATGCCCAACTC
genomic: GAAAAACCCTAGCTAGTCCACTCCCCCTTCCTCCGTTCGATCAACAATGgtaccatctt ... aaaaatgcagACAGGAGAAGCAGTGAACCCCAAAGCTTACCCTTTGGCGGATGCCCAACTC
EST: gi|298164419|gb|HO014064.1|HO014064
EST:     GGAAAAACCCTAGCTAGTCCACTCCCCCTTCCTCCGTTCGATCAACAATG                         ACAGGAGAAGCAGTGGACCCCAAAGCTTACCCTTTGGCGGATGCCCAACTC
genomic: GGAAAAACCCTAGCTAGTCCACTCCCCCTTCCTCCGTTCGATCAACAATGgtaccatctt ... aaaaatgcagACAGGAGAAGCAGTGAACCCCAAAGCTTACCCTTTGGCGGATGCCCAACTC