1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' | 23 5' 3' | 24 5' 3' | 25 5' 3' |
ATGTAAGCTTTGAAGATGGAAGTATTGGCATTCTTACTGTCCCTGCGCTCAGATTAAGATGTAGAATAAATCAATCTGCTTATCTCCATCCCAACCCAAGgtgcgtttttattacaattgtaacgaatgatctgttattgaaacttgaaagtttcttttctcatatctgataaaattatcttttgacag
species | Glycine max |
transcript | GLYMA17G12110.2 |
intron # | 25 |
splice site | 5' |
intron type | U2 |
EST: AGATTAAGATGTAGAATAAATCAATCTGCTTATCTCCATCCCAACCCAAG CTTGAGAGTGCATCCTCTTGTGATTGCTGCACATCCCTCCGAACCCAATCAEST: gi|22926918|gb|BU544057.1|BU544057
genomic: AGATTAAGATGTAGAATAAATCAATCTGCTTATCTCCATCCCAACCCAAGgtgcgttttt ... cttttgacagCTTGAGAGTGCATCCTCTTGTGATTGCTGCACATCCCTCCGAACCCAATCA
EST: AGATTAAGATGTAGAATAAATCAATCTGCTTATCTCCATCCCAACCCAAG CTTGAGAGTGCATCCTCTTGTGATTGCTGCACATCCCTCCGAACCCAATCAEST: gi|16348877|gb|BI974472.1|BI974472
genomic: AGATTAAGATGTAGAATAAATCAATCTGCTTATCTCCATCCCAACCCAAGgtgcgttttt ... cttttgacagCTTGAGAGTGCATCCTCTTGTGATTGCTGCACATCCCTCCGAACCCAATCA
EST: AGATTAAGATGTAGAATAAATCAATCTGCTTATCTCCATCCCAACCCAAG CTTGAGAGTGCATCCTCTTGTGATTGCTGCACATCCCTCCTAACCCAATCAEST: gi|58018746|gb|CX705488.1|CX705488
genomic: AGATTAAGATGTAGAATAAATCAATCTGCTTATCTCCATCCCAACCCAAGgtgcgttttt ... cttttgacagCTTGAGAGTGCATCCTCTTGTGATTGCTGCACATCCCTCCGAACCCAATCA
EST: AGATTAAGATGTAGAATAAATCAATCTGCTTATCTCCATCCCAACCCAAG CTTGAGAGTGCATCCTCTTGTGATTGCTGCACATCCCTCCGAACCCAATCAEST: gi|6341823|gb|AW164647.1|AW164647
genomic: AGATTAAGATGTAGAATAAATCAATCTGCTTATCTCCATCCCAACCCAAGgtgcgttttt ... cttttgacagCTTGAGAGTGCATCCTCTTGTGATTGCTGCACATCCCTCCGAACCCAATCA
EST: AGATTAAGATGTAGAATAAATCAATCTGCTTATCTCCATCCCAACCCAAG CTTGAGAGTGCATCCTCTTGTGATTGCTGCACATCCCTCCGAACCCAATCAEST: gi|7640283|gb|AW734588.1|AW734588
genomic: AGATTAAGATGTAGAATAAATCAATCTGCTTATCTCCATCCCAACCCAAGgtgcgttttt ... cttttgacagCTTGAGAGTGCATCCTCTTGTGATTGCTGCACATCCCTCCGAACCCAATCA
EST: AGATTAAGATGTAGAATAAATCAATCTGCTTATCTCCATCCCAACCCAAG CTTGAGAGTGCATCCTCTTGTGATTGCTGCACATCCCTCCGAACCCAATCAEST: gi|13482451|gb|BG511794.1|BG511794
genomic: AGATTAAGATGTAGAATAAATCAATCTGCTTATCTCCATCCCAACCCAAGgtgcgttttt ... cttttgacagCTTGAGAGTGCATCCTCTTGTGATTGCTGCACATCCCTCCGAACCCAATCA
EST: CTTATCTCCATCCCAACCCAAG CTTGAGAGTGCATCCTCTTGTGATTGCTGCACATCCCTCCGAACCCAATCA
genomic: CTTATCTCCATCCCAACCCAAGgtgcgttttt ... cttttgacagCTTGAGAGTGCATCCTCTTGTGATTGCTGCACATCCCTCCGAACCCAATCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGTAAGCTTTGAAGATGGAAGTATTGGCATTCTTACTGTCCCTGCGCTCAGATTAAGATGTAGAATAAATCAATCTGCTTATCTCCATCCCAACCCAAGgtgcgtttttattacaattgtaacgaatgatctgttattgaaacttgaaagtttcttttctcatatctgataaaattatcttttgacag
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