1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gtaatttttcattctatttctagttcgtgattttgtttttaaaaccatttgtagttattaagattctgcgtgaaatttttgtgcagttatttcttttgcattgatttttagtgttttatcttattttatttttgcagGCTCCCCCTGTGAAGGAGCTTCGGAAGTTATTAAGGATCCAAGCTCTACGTTGCCATCCTATATATTGTCAAAATGGGACAAGACTGAATGTAATTCCTG
species | Glycine max |
transcript | GLYMA17G11820.1 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: AGCTTTCTACCGACTATTGTTATGCTTTCAAAGTGCGAAAGCCAGGAATG GCTCCCCCTGTGAAGGAGCTTCGGAAGTTATTAAGGATCCAAGCTCTACGTEST: gi|11688267|gb|BF595943.1|BF595943
genomic: AGCTTTCTACCGACTATTGTTATGCTTTCAAAGTGCGAAAGCCAGGAATGgtaatttttc ... atttttgcagGCTCCCCCTGTGAAGGAGCTTCGGAAGTTATTAAGGATCCAAGCTCTACGT
EST: AGCTTTCTACCGACTATTGTTATGCTTTCAAAGTGCGAAAGCCAGGAATG GCTCCCCCTGTGAAGGAGCTTCAGAAGTTATTAAGGATCCAAGCTCTACGTEST: gi|6567259|gb|AW234870.1|AW234870
genomic: AGCTTTCTACCGACTATTGTTATGCTTTCAAAGTGCGAAAGCCAGGAATGgtaatttttc ... atttttgcagGCTCCCCCTGTGAAGGAGCTTCGGAAGTTATTAAGGATCCAAGCTCTACGT
EST: TCTACCGACTATTGTTATGCTTTCAAAGTGCGAAAGCCAGGAATG GCTCCCCCTGTGAAGGAGCTTCGGAAGTTATTAAGGATCCAAGCTCTACGTEST: gi|7690945|gb|AW759081.1|AW759081
genomic: TCTACCGACTATTGTTATGCTTTCAAAGTGCGAAAGCCAGGAATGgtaatttttc ... atttttgcagGCTCCCCCTGTGAAGGAGCTTCGGAAGTTATTAAGGATCCAAGCTCTACGT
EST: AGCTTTCTACCGACTATTGTTATGCTTTCAAAGTGCGAAAGCCAGGAATG GCTCCCCCTGTGAAGGAGCTTCGGAAGTTATTAAGGATCCAAGCTCTACGTEST: gi|22522112|gb|BU080923.1|BU080923
genomic: AGCTTTCTACCGACTATTGTTATGCTTTCAAAGTGCGAAAGCCAGGAATGgtaatttttc ... atttttgcagGCTCCCCCTGTGAAGGAGCTTCGGAAGTTATTAAGGATCCAAGCTCTACGT
EST: AGCTTTCTACCGACTATTGTTATGCTTTCAAAGTGCGAAAGCCAGGAATG GCTCCCCCTGTGAAGGAGCTTCGGAAGTTATTAAGGATCCAAGCTCTACGTEST: gi|10843300|gb|BF066607.1|BF066607
genomic: AGCTTTCTACCGACTATTGTTATGCTTTCAAAGTGCGAAAGCCAGGAATGgtaatttttc ... atttttgcagGCTCCCCCTGTGAAGGAGCTTCGGAAGTTATTAAGGATCCAAGCTCTACGT
EST: AGCTTTCTACCGACTATTGTTATGCTTTCAAAGTGCGAAAGCCAGGAATG GCTCCCCCTGTGAAGGAGCTTCGGAAGTTATTAAGGATCCAAGCTCTACGT
genomic: AGCTTTCTACCGACTATTGTTATGCTTTCAAAGTGCGAAAGCCAGGAATGgtaatttttc ... atttttgcagGCTCCCCCTGTGAAGGAGCTTCGGAAGTTATTAAGGATCCAAGCTCTACGT
gcagttatttcttttgcattgatttttagtgttttatcttattttatttttgcagGCTCCCCCTGTGAAGGAGCTTCGGAAGTTATTAAGGATCCAAGCTCTACGTTGCCATCCTATATATTGTCAAAATGGGACAAGACTGAATGTAATTCCTG
cattgat putative branch site (score: 4)
tcttattttattttt putative PPT
attgatttttagtgtt TA-rich tract