1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
CAACTAGGGAGCCTGGTGTTACATTTTTGGCGGCCAAGTTTGATGGTATACTGGGACTTGGATTTCAAGAGATATCAGTTGGAAATGCTGCTCCAGTGTGgtatgttactatttaaatttcgattcctcattttgttagaagtttattgaatttattgaattttgttagtgcttactacatcagaccctactggatctaa...
species | Glycine max |
transcript | GLYMA17G01500.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: CTGGGACTTGGATTTCAAGAGATATCAGTTGGAAATGCTGCTCCAGTGTG GTACAACATGGTTGACCAAGGTCTTCTTAAGGAACCAGTATTTTCATTTTGEST: gi|208290744|gb|GE087638.1|GE087638
genomic: CTGGGACTTGGATTTCAAGAGATATCAGTTGGAAATGCTGCTCCAGTGTGgtatgttact ... cctgtcacagGTACAACATGGTTGACCAAGGTCTTCTTAAGGAACCAGTATTTTCATTTTG
EST: CTGGGACTTGGATTTCAAGAGATATCAGTTGGAAATGCTGCTCCAGTGTG GTACAACATGGTTGACCAAGGTCTTCTTAAGGAACCAGTATTTTCATTTTGEST: gi|163922686|gb|EH038736.1|EH038736
genomic: CTGGGACTTGGATTTCAAGAGATATCAGTTGGAAATGCTGCTCCAGTGTGgtatgttact ... cctgtcacagGTACAACATGGTTGACCAAGGTCTTCTTAAGGAACCAGTATTTTCATTTTG
EST: CTGGGACTTGGATTTCAAGAGATATCAGTTGGAAATGCTGCTCCAGTGTG GTACAACATGGTTGACCAAGGTCTTCTTAAGGAACCAGTATTTTCATTTTGEST: gi|193656840|gb|FK606280.1|FK606280
genomic: CTGGGACTTGGATTTCAAGAGATATCAGTTGGAAATGCTGCTCCAGTGTGgtatgttact ... cctgtcacagGTACAACATGGTTGACCAAGGTCTTCTTAAGGAACCAGTATTTTCATTTTG
EST: CTGGGACTTGGATTTCAAGAGATATCAGTTGGAAATGCTGCTCCAGTGTG GTACAACATGGTTGACCAAGGTCTTCTTAAGGAACCAGTATEST: gi|208136483|gb|GD940633.1|GD940633
genomic: CTGGGACTTGGATTTCAAGAGATATCAGTTGGAAATGCTGCTCCAGTGTGgtatgttact ... cctgtcacagGTACAACATGGTTGACCAAGGTCTTCTTAAGGAACCAGTAT
EST: CTGGGACTTGGATTTCAAGAGATATCAGTTGGAAATGCTGCTCCAGTGTG GTACAACATGGTTGACCAAGGTCTTCTTAAGGAACCAGTATTTTCATTTTGEST: gi|207797739|gb|GD771551.1|GD771551
genomic: CTGGGACTTGGATTTCAAGAGATATCAGTTGGAAATGCTGCTCCAGTGTGgtatgttact ... cctgtcacagGTACAACATGGTTGACCAAGGTCTTCTTAAGGAACCAGTATTTTCATTTTG
EST: CTGGGACTTGGATTTCAAGAGATATCAGTTGGAAATGCTGCTCCAGTGTG GTACAACATGGTTGACCAAGGTCTTCTTAAGGAACCAGTATTTTCATTTTG
genomic: CTGGGACTTGGATTTCAAGAGATATCAGTTGGAAATGCTGCTCCAGTGTGgtatgttact ... cctgtcacagGTACAACATGGTTGACCAAGGTCTTCTTAAGGAACCAGTATTTTCATTTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAACTAGGGAGCCTGGTGTTACATTTTTGGCGGCCAAGTTTGATGGTATACTGGGACTTGGATTTCAAGAGATATCAGTTGGAAATGCTGCTCCAGTGTGgtatgttactatttaaatttcgattcctcattttgttagaagtttattgaatttattgaattttgttagtgcttactacatcagaccctactggatctaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT