1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
TTAGTGTAAGTGAGATTGAAGCGCTATATGAATTGTTCAAGAAGATCAGCAGTGCAGTGATTGATGACGGACTAATTAATAAGgtttttttatatcatcttttgctctgtccttctatcagtttgtgttatgaacttgtgatatttgtattttcaacatttctggactgtgacatttttccta...
species | Glycine max |
transcript | GLYMA17G00830.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TGTTCAAGAAGATCAGCAGTGCAGTGATTGATGACGGACTAATTAATAAG GAAGAATTTCAGTTGGCATTGTTCAAGACGAACAAGAAAGAGAGCTTATTTEST: gi|9820145|gb|BE555655.1|BE555655
genomic: TGTTCAAGAAGATCAGCAGTGCAGTGATTGATGACGGACTAATTAATAAGgtttttttat ... tacatggcagGAAGAATTTCAGTTGGCATTGTTCAAGACGAACAAGAAAGAGAGCTTATTT
EST: GTGATTGATGACGGACTAATTAATAAG GAAGAATTTCAGTTGGCATTGTTCAAGACGAACAAGAAAGAGAGCTTATTTEST: gi|151412447|gb|EV282259.1|EV282259
genomic: GTGATTGATGACGGACTAATTAATAAGgtttttttat ... tacatggcagGAAGAATTTCAGTTGGCATTGTTCAAGACGAACAAGAAAGAGAGCTTATTT
EST: TGTTCAAGAAGATCAGCAGTGCAGTGATTGATGACGGACTAATTAATAAG GAAGAATTTCAGTTGGCATTGTTCAAGACGAACAAGAAAGAGAGCTTATTT
genomic: TGTTCAAGAAGATCAGCAGTGCAGTGATTGATGACGGACTAATTAATAAGgtttttttat ... tacatggcagGAAGAATTTCAGTTGGCATTGTTCAAGACGAACAAGAAAGAGAGCTTATTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTAGTGTAAGTGAGATTGAAGCGCTATATGAATTGTTCAAGAAGATCAGCAGTGCAGTGATTGATGACGGACTAATTAATAAGgtttttttatatcatcttttgctctgtccttctatcagtttgtgttatgaacttgtgatatttgtattttcaacatttctggactgtgacatttttccta
- - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - AGATCA