1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GATGCCTCTTCAGGTTGTGTATGTAAATGAAACTGGCACTGCCAAATACCGTACTGCCTCCTTTGGTTTTGGAAGTGGAACTCTTCATGGTCACTTGCTGgtaactgtcttttttcccatcttgatgcttttattttcctcttcctctttttaagttgggtctgtagccttatatactatgcaattgcataaatatataa...
species | Glycine max |
transcript | GLYMA16G22910.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GTACTGCCTCCTTTGGTTTTGGAAGTGGAACTCTTCATGGTCACTTGCTG GCAGGGGAAGAGCGCTTTTCAATTGAGATTGATGAGAACAATCAAGTTTGGEST: gi|213590342|gb|DB963877.1|DB963877
genomic: GTACTGCCTCCTTTGGTTTTGGAAGTGGAACTCTTCATGGTCACTTGCTGgtaactgtct ... ttggccacagGCAGGGGAAGAGCGCTTTTCAATTGAGATTGATGAGAACAATCAAGTTTGG
EST: GTACTGCCTCCTTTGGTTTTGGAAGTGGGACTCTTCATGGTCACTTGCTG GCAGGGGAAGAGCGCTTTTCAATTGAGATTGATGAGAEST: gi|15000576|gb|BI321390.1|BI321390
genomic: GTACTGCCTCCTTTGGTTTTGGAAGTGGAACTCTTCATGGTCACTTGCTGgtaactgtct ... ttggccacagGCAGGGGAAGAGCGCTTTTCAATTGAGATTGATGAGA
EST: GTACTGCCTCCTTTGGTTTTGGAAGTGGAACTCTTCATGGTCACTTGCTG GCAGGGGAAGAGCGCTTTTCAATTGAGATTGATGAGAACAATCAAGTTTGGEST: gi|151405142|gb|EV274956.1|EV274956
genomic: GTACTGCCTCCTTTGGTTTTGGAAGTGGAACTCTTCATGGTCACTTGCTGgtaactgtct ... ttggccacagGCAGGGGAAGAGCGCTTTTCAATTGAGATTGATGAGAACAATCAAGTTTGG
EST: GTACTGCCTCCTTTGGTTTTGGAAGTGGAACTCTTCATGGTCACTTGCTG GCAGGGGAAGAGCGCTTTTCAATTGAGATTGATGAGAACAATCAAGTTTGGEST: gi|298194598|gb|HO043070.1|HO043070
genomic: GTACTGCCTCCTTTGGTTTTGGAAGTGGAACTCTTCATGGTCACTTGCTGgtaactgtct ... ttggccacagGCAGGGGAAGAGCGCTTTTCAATTGAGATTGATGAGAACAATCAAGTTTGG
EST: GTACTGCCTCCTTTGGTTTTGGAAGTGGAACTCTTCATGGTCACTTGCTG GCAGGGGAAGAGCGCTTEST: gi|298168986|gb|HO020290.1|HO020290
genomic: GTACTGCCTCCTTTGGTTTTGGAAGTGGAACTCTTCATGGTCACTTGCTGgtaactgtct ... ttggccacagGCAGGGGAAGAGCGCTT
EST: GTACTGCCTCCTTTGGTTTTGGAAGTGGAACTCTTCATGGTCACTTGCTG GCAGGGGAAGAGCGCTTTTCAATTGAG
genomic: GTACTGCCTCCTTTGGTTTTGGAAGTGGAACTCTTCATGGTCACTTGCTGgtaactgtct ... ttggccacagGCAGGGGAAGAGCGCTTTTCAATTGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATGCCTCTTCAGGTTGTGTATGTAAATGAAACTGGCACTGCCAAATACCGTACTGCCTCCTTTGGTTTTGGAAGTGGAACTCTTCATGGTCACTTGCTGgtaactgtcttttttcccatcttgatgcttttattttcctcttcctctttttaagttgggtctgtagccttatatactatgcaattgcataaatatataa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cttcctc