1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
AAGGTAGTTCGTTGGTCACTACCTGCTCATAGCGACACACACAGCTGCTGGCTACGGATACATAAAATCGTTCCCAGATTCAAAACCTGgtactccaatctctcaatcattgcattcatagcataattaccatttcccatttgcacacagcttattctctactaattttactttgtacttcggttctaacgctgttttgcttcacgttgttgttatcacacgacatgtttgtgaaaatgcttaacag
species | Glycine max |
transcript | GLYMA16G22910.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CACAGCTGCTGGCTACGGATACATAAAATCGTTCCCAGATTCAAAACCTG AGATGCTTTTCTTGAGCTGGGGTCGCCCCTCTCCCCAAGACCAAAAGACTTEST: gi|151407653|gb|EV277468.1|EV277468
genomic: CACAGCTGCTGGCTACGGATACATAAAATCGTTCCCAGATTCAAAACCTGgtactccaat ... tgcttaacagAGATGCTTTTCTTGAGCTGGGGTCGCCCCTCTCCCCAAGACCAAAAGACTT
EST: CACAGCTGCTGGCTACGGATACATAAAATCGTTCCCAGATTCAAAACCTG AGATGCTTTTCTTGAGCTGGGGTCGCCCCTCTCCCCAAGACCAAAAGACTTEST: gi|213590342|gb|DB963877.1|DB963877
genomic: CACAGCTGCTGGCTACGGATACATAAAATCGTTCCCAGATTCAAAACCTGgtactccaat ... tgcttaacagAGATGCTTTTCTTGAGCTGGGGTCGCCCCTCTCCCCAAGACCAAAAGACTT
EST: CACAGCTGCTGGCTACGGATACATAAAATCGTTCCCAGATTCAAAACCTG AGATGCTTTTCTTGAGCTGGGGTCGCCCCTCTCCCCAAGACCAAAAGACTTEST: gi|15000576|gb|BI321390.1|BI321390
genomic: CACAGCTGCTGGCTACGGATACATAAAATCGTTCCCAGATTCAAAACCTGgtactccaat ... tgcttaacagAGATGCTTTTCTTGAGCTGGGGTCGCCCCTCTCCCCAAGACCAAAAGACTT
EST: CACAGCTGCTGGCTACGGATACATAAAATCGTTCCCAGATTCAAAACCTG AGATGCTTTTCTTGAGCTGGGGTCGCCCCTCTCCCCAAGACCAAAAGACTTEST: gi|151405142|gb|EV274956.1|EV274956
genomic: CACAGCTGCTGGCTACGGATACATAAAATCGTTCCCAGATTCAAAACCTGgtactccaat ... tgcttaacagAGATGCTTTTCTTGAGCTGGGGTCGCCCCTCTCCCCAAGACCAAAAGACTT
EST: CACAGCTGCTGGCTACGGATACATAAAATCGTTCCCAGATTCAAAACCTG AGATGCTTTTCTTGAGCTGGGGTCGCCCCTCTCCCCAAGACCAAAAGACTTEST: gi|298194598|gb|HO043070.1|HO043070
genomic: CACAGCTGCTGGCTACGGATACATAAAATCGTTCCCAGATTCAAAACCTGgtactccaat ... tgcttaacagAGATGCTTTTCTTGAGCTGGGGTCGCCCCTCTCCCCAAGACCAAAAGACTT
EST: CACAGCTGCTGGCTACGGATACATAAAATCGTTCCCAGATTCAAAACCTG AGATGCTTTTCTTGAGCTGGGGTCGCCCCTCTCCCCAAGACCAAAAGACTTEST: gi|298168986|gb|HO020290.1|HO020290
genomic: CACAGCTGCTGGCTACGGATACATAAAATCGTTCCCAGATTCAAAACCTGgtactccaat ... tgcttaacagAGATGCTTTTCTTGAGCTGGGGTCGCCCCTCTCCCCAAGACCAAAAGACTT
EST: CACAGCTGCTGGCTACGGATACATAAAATCGTTCCCAGATTCAAAACCTG AGATGCTTTTCTTGAGCTGGGGTCGCCCCTCTCCCCAAGACCAAAAGACTT
genomic: CACAGCTGCTGGCTACGGATACATAAAATCGTTCCCAGATTCAAAACCTGgtactccaat ... tgcttaacagAGATGCTTTTCTTGAGCTGGGGTCGCCCCTCTCCCCAAGACCAAAAGACTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAGGTAGTTCGTTGGTCACTACCTGCTCATAGCGACACACACAGCTGCTGGCTACGGATACATAAAATCGTTCCCAGATTCAAAACCTGgtactccaatctctcaatcattgcattcatagcataattaccatttcccatttgcacacagcttattctctactaattttactttgtacttcggttctaacgctgttttgcttcacgttgttgttatcacacgacatgtttgtgaaaatgcttaacag
- - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - AGCTGC
- - - - - - - - - - - - - - - - - - - - - GCTGCT