1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
ATCTCCGATACCCTTTAAACATCCAATGCATGTGGTAGTGGGTAGACCAATTGAGCTCGAGAAAACTCCCGAGCCAACTCCTGAGGAGgtatatactatcatgcctctttattttaactggcattcaccaagtatccatagtaactttatgtcatcttctagttaaaaaagtttgtcttttcatcttt...
species | Glycine max |
transcript | GLYMA16G21960.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: TGGGTAGACCAATTGAGCTCGAGAAAACTCCCGAGCCAACTCCTGAGGAG GTTGCCAAAATACATAGCCAGTTTGTTGAAGCACTTCAAGATCTATTTGAAEST: gi|20497895|gb|BQ272825.1|BQ272825
genomic: TGGGTAGACCAATTGAGCTCGAGAAAACTCCCGAGCCAACTCCTGAGGAGgtatatacta ... tttgttttagGTTGCCAAAATACATAGCCAGTTTGTTGAAGCACTTCAAGATCTATTTGAA
EST: TGGGTAGACCAATTGAGCTCGAGAAAACTCCCGAGCCAACTCCTGAGGAG GTTGCCAAAATACATAGCCAGTTTGTTGAAGCACTTCAAGATCTATTTGAAEST: gi|31561365|gb|CD487203.1|CD487203
genomic: TGGGTAGACCAATTGAGCTCGAGAAAACTCCCGAGCCAACTCCTGAGGAGgtatatacta ... tttgttttagGTTGCCAAAATACATAGCCAGTTTGTTGAAGCACTTCAAGATCTATTTGAA
EST: TGGGTAGACCAATTGAGCTCGAGAAAACTCCCGAGCCAACTCCTGAGGAG GTTGCCAAAATACATAGCCAGTTTGTTGAAGCACTTCAAGATCTATTTGAAEST: gi|7588080|gb|AW703883.1|AW703883
genomic: TGGGTAGACCAATTGAGCTCGAGAAAACTCCCGAGCCAACTCCTGAGGAGgtatatacta ... tttgttttagGTTGCCAAAATACATAGCCAGTTTGTTGAAGCACTTCAAGATCTATTTGAA
EST: TGGGTAGACCAATTGAGCTCGAGAAAACTCCCGAGCCAACTCCTGAGGAG GTTGCCAAAATACATAGCCAGTTTGTTGAAGCACTTCAAGATCTATTTGAAEST: gi|298194793|gb|HO043265.1|HO043265
genomic: TGGGTAGACCAATTGAGCTCGAGAAAACTCCCGAGCCAACTCCTGAGGAGgtatatacta ... tttgttttagGTTGCCAAAATACATAGCCAGTTTGTTGAAGCACTTCAAGATCTATTTGAA
EST: TGGGTAGACCAATTGAGCTCGAGAAAACTCCCGAGCCAACTCCTGAGGAG GTTGCCAAAATACATAGCCAGTTTGTTGAAGCACTTCAAGATCTATTTGAAEST: gi|7639233|gb|AW733560.1|AW733560
genomic: TGGGTAGACCAATTGAGCTCGAGAAAACTCCCGAGCCAACTCCTGAGGAGgtatatacta ... tttgttttagGTTGCCAAAATACATAGCCAGTTTGTTGAAGCACTTCAAGATCTATTTGAA
EST: TGGGTAGACCAATTGAGCTCGAGAAAACTCCCGAGCCAACTCCTGAGGAG GTTGCCAAAATACATAGCCAGTTTGTTGAAGCACTTCAAGATCTATTTGAAEST: gi|6848922|gb|AW351212.1|AW351212
genomic: TGGGTAGACCAATTGAGCTCGAGAAAACTCCCGAGCCAACTCCTGAGGAGgtatatacta ... tttgttttagGTTGCCAAAATACATAGCCAGTTTGTTGAAGCACTTCAAGATCTATTTGAA
EST: TGGGTAGACCAATTGAGCTCGAGAAAACTCCCGAGCCAACTCNNGAGGAG GTTGCCAAAATACATAGCCAGTTTGTTGAAGCACTTCAAGATCTATTTGAAEST: gi|31309338|gb|CD394541.1|CD394541
genomic: TGGGTAGACCAATTGAGCTCGAGAAAACTCCCGAGCCAACTCCTGAGGAGgtatatacta ... tttgttttagGTTGCCAAAATACATAGCCAGTTTGTTGAAGCACTTCAAGATCTATTTGAA
EST: ATTGAGCTCGAGAAAACTCCCGAGCCAACTCCTGAGGAG GTTGCCAAAATACATAGCCAGTTTGTTGAAGCACTTCAAGATCTATTTGAA
genomic: ATTGAGCTCGAGAAAACTCCCGAGCCAACTCCTGAGGAGgtatatacta ... tttgttttagGTTGCCAAAATACATAGCCAGTTTGTTGAAGCACTTCAAGATCTATTTGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATCTCCGATACCCTTTAAACATCCAATGCATGTGGTAGTGGGTAGACCAATTGAGCTCGAGAAAACTCCCGAGCCAACTCCTGAGGAGgtatatactatcatgcctctttattttaactggcattcaccaagtatccatagtaactttatgtcatcttctagttaaaaaagtttgtcttttcatcttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG