1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GAACCGTCGTGGGACATCAGAAGGTCCTGCTTGGACTGGTGCACTGATCACAATATTGAGTTCATTGAGGCATGTGCTTCCAATGCTGATTTTGACAAATgtaaaacttcacttcccgatgtaattagctggtttataacatatttcacatgagcctgatttttgctttggcaaatgctcaattttcgatgtagatgagt...
species | Glycine max |
transcript | GLYMA16G21560.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CAATATTGAGTTCATTGAG-CATGTGCTTCCAATGCTGATTTTGACAA-T GTTTGTCGATTGATGGTGATTTEST: gi|151405714|gb|EV275528.1|EV275528
genomic: CAATATTGAGTTCATTGAGGCATGTGCTTCCAATGCTGATTTTGACAAATgtaaaacttc ... tattttacagGTTTGTCGATTGATGGTGATTT
EST: CAATATTGAGTTCATTGAGGCATGTGCTTCCAATGCTGATTTTGACAAAT GTTTGTCGATTGATGGTGATTTACEST: gi|151409293|gb|EV279101.1|EV279101
genomic: CAATATTGAGTTCATTGAGGCATGTGCTTCCAATGCTGATTTTGACAAATgtaaaacttc ... tattttacagGTTTGTCGATTGATGGTGATTTAC
EST: CAATATTGAGTTCATTGAGGCATGTGCTTCCAATGCTGATTTTGACAAAT GTTTGTCGATTGATGGTGATTTACAAGGAGTTGAGCGTCTCTACGGTGCAC
genomic: CAATATTGAGTTCATTGAGGCATGTGCTTCCAATGCTGATTTTGACAAATgtaaaacttc ... tattttacagGTTTGTCGATTGATGGTGATTTACAAGGAGTTGAGCGTCTCTACGGTGCAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAACCGTCGTGGGACATCAGAAGGTCCTGCTTGGACTGGTGCACTGATCACAATATTGAGTTCATTGAGGCATGTGCTTCCAATGCTGATTTTGACAAATgtaaaacttcacttcccgatgtaattagctggtttataacatatttcacatgagcctgatttttgctttggcaaatgctcaattttcgatgtagatgagt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT