1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
ATTGGCTCATCGTCATGGAATTCAAAGACAACAACAAACCCTCTCCCGAAGACATGGTTCGCGTTTACGAAGAGACTTGTGCCAAGGGTCTTAACATCAGgttcctctctcaaataataagtctttctcataattatcagagttttttttttatcggcaaatgttagtttgttagttttgttagaaatatcagttttagtttgtttcttagtcgtcgtggtttttctttgaatgcgtgcgtggttttag
species | Glycine max |
transcript | GLYMA08G20130.3 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GACATGGTTCGCGTTTACGAAGAGACTTGTGCCAAGGGTCTTAACATCAG TTTGGAAGAGGCCAAGAAGAAAATGTATGCGTGCAGCACAACAACTTACATEST: gi|298190758|gb|HO032879.1|HO032879
genomic: GACATGGTTCGCGTTTACGAAGAGACTTGTGCCAAGGGTCTTAACATCAGgttcctctct ... gtggttttagTTTGGAAGAGGCCAAGAAGAAAATGTATGCGTGCAGCACAACAACTTACAT
EST: GACATGGTTCGCGTTTACGAAGAGACTTGTGCCAAGGGTCTTAACATCAG TTTGGAAGAGGCCAAGAAGAAAATGTATGCGTGCAGCACAACEST: gi|213613867|gb|DB960902.1|DB960902
genomic: GACATGGTTCGCGTTTACGAAGAGACTTGTGCCAAGGGTCTTAACATCAGgttcctctct ... gtggttttagTTTGGAAGAGGCCAAGAAGAAAATGTATGCGTGCAGCACAAC
EST: GACATGGTTCGCGTTTACGAAGAGACTTGTGCCAAGGGTCTTAACATCAG TTTGGAAGAGGCCAAGAAGAAAATGTATGCGTGCAGCACAACAACTTACATEST: gi|213601414|gb|DB956706.1|DB956706
genomic: GACATGGTTCGCGTTTACGAAGAGACTTGTGCCAAGGGTCTTAACATCAGgttcctctct ... gtggttttagTTTGGAAGAGGCCAAGAAGAAAATGTATGCGTGCAGCACAACAACTTACAT
EST: GACATGGTTCGCGTTTACGAAGAGACTTGTGCCAAGGGTCTTAACATCAG TTTGGAAGAGGCCAAGAAGAAAATGTATGCGTGCAGCACAACAACTTACATEST: gi|151410130|gb|EV279938.1|EV279938
genomic: GACATGGTTCGCGTTTACGAAGAGACTTGTGCCAAGGGTCTTAACATCAGgttcctctct ... gtggttttagTTTGGAAGAGGCCAAGAAGAAAATGTATGCGTGCAGCACAACAACTTACAT
EST: GACATGGTTCGCGTTTACGAAGAGACTTGTGCCAAGGGTCTTAACATCAG TTTGGAAGAGGCCAAGAAGAAAATGTATGCGTGCAGCACAACAACTTACATEST: gi|193686750|gb|FK626115.1|FK626115
genomic: GACATGGTTCGCGTTTACGAAGAGACTTGTGCCAAGGGTCTTAACATCAGgttcctctct ... gtggttttagTTTGGAAGAGGCCAAGAAGAAAATGTATGCGTGCAGCACAACAACTTACAT
EST: GACATGGTTCGCGTTTACGAAGAGACTTGTGCCAAGGGTCTTAACATCAG TTTGGAAGAGGCCAAGAAGAAAATGTATGCGTGCAGCACAACAACTTACATEST: gi|14205425|gb|BG839103.1|BG839103
genomic: GACATGGTTCGCGTTTACGAAGAGACTTGTGCCAAGGGTCTTAACATCAGgttcctctct ... gtggttttagTTTGGAAGAGGCCAAGAAGAAAATGTATGCGTGCAGCACAACAACTTACAT
EST: GACATGGTTCGCGTTTACGAAGAGACTTGTGCCAAGGGTCTTAACATCAG TTTGGAAGAGGCCAAGAAGAAAATGTATGCGTGCAGCACAACAACTTACATEST: gi|298168283|gb|HO014458.1|HO014458
genomic: GACATGGTTCGCGTTTACGAAGAGACTTGTGCCAAGGGTCTTAACATCAGgttcctctct ... gtggttttagTTTGGAAGAGGCCAAGAAGAAAATGTATGCGTGCAGCACAACAACTTACAT
EST: GACATGGTTCGCGTTTACGAAGAGACTTGTGCCAAGGGTCTTAACATCAG TTTGGAAGAGGCCAAGAAGAAAATGTATGCGTGCAGCACAACAACTTACAT
genomic: GACATGGTTCGCGTTTACGAAGAGACTTGTGCCAAGGGTCTTAACATCAGgttcctctct ... gtggttttagTTTGGAAGAGGCCAAGAAGAAAATGTATGCGTGCAGCACAACAACTTACAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTGGCTCATCGTCATGGAATTCAAAGACAACAACAAACCCTCTCCCGAAGACATGGTTCGCGTTTACGAAGAGACTTGTGCCAAGGGTCTTAACATCAGgttcctctctcaaataataagtctttctcataattatcagagttttttttttatcggcaaatgttagtttgttagttttgttagaaatatcagttttagtttgtttcttagtcgtcgtggtttttctttgaatgcgtgcgtggttttag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGA