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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GACATCCTTCAGACTGGAAAAACCGGTTTCACAGCTTATTCCATATATTGAAACATTAGAACATGATATGCACGACGAAATAGCTCTACCAAATACAGAGgttttggttttgcccttgcttgtgttcttatatttttttttttccctaagactgtttaggcatatggcttataagctatttaaccttaacag

Basic information

species Glycine max
transcript GLYMA08G19740.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|213603049|gb|DB960382.1|DB960382
EST:     AAACATTAGAACATGATATGCACGACGAAATAGCTCTACCAAATACAGAG                         GTGGCTCTCCTGTCCATGCACCAAAGTATTCCACCTAACTGTACTGACGTG
genomic: AAACATTAGAACATGATATGCACGACGAAATAGCTCTACCAAATACAGAGgttttggttt ... accttaacagGTGGCTCTCCTGTCCATGCACCAAAGTATTCCACCTAACTGTACTGACGTG
EST: gi|209710030|gb|BW658858.1|BW658858
EST:     AAACATTAGAACATGATATGCACGACGAAATAGCTCTACCAAATACAGAG                         GTGGCTCTCCTGTCCATGCACCAAAGTATTCCACCTAACTGTACTGACGTG
genomic: AAACATTAGAACATGATATGCACGACGAAATAGCTCTACCAAATACAGAGgttttggttt ... accttaacagGTGGCTCTCCTGTCCATGCACCAAAGTATTCCACCTAACTGTACTGACGTG
EST: gi|213593778|gb|DB957898.1|DB957898
EST:     AAACATTAGAACATGATATGCACGACGAAATAGCTCTACCAAATACAGAG                         GTGGCTCTCCTGTCCATGCACCAAAGTATTCCACCTAACTGTACTGACGTG
genomic: AAACATTAGAACATGATATGCACGACGAAATAGCTCTACCAAATACAGAGgttttggttt ... accttaacagGTGGCTCTCCTGTCCATGCACCAAAGTATTCCACCTAACTGTACTGACGTG