1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GAAGAAGAGGACAAAGATGACTTGGACGGTACTGTTTCAGTCATTTCTTTGCGGCTTATTTGGgtatgtatgtatgtaagtcttttaattttaatttattgacctgctccttcatcatcgtttccttgacgatgttcttctttcggctttagttttaattcaa...
species | Glycine max |
transcript | GLYMA08G19460.3 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AAGATGACTTGGACGGTACTGTTTCAGTCATTTCTTTGCGGCTTA-TTGG GGGATCATTAGCTCAAAATTTCTACTTACAAGCCCTGGCTTTAACTTCTGCEST: gi|7587992|gb|AW703797.1|AW703797
genomic: AAGATGACTTGGACGGTACTGTTTCAGTCATTTCTTTGCGGCTTATTTGGgtatgtatgt ... taatatgcagGGGATCATTAGCTCAAAATTTCTACTTACAAGCCCTGGCTTTAACTTCTGC
EST: TTTCTTTGCGGCTTATTTGG GGGATCATTAGCTCAAAATTTCTACTTACAAGCCCTGGCTTTAACTTCTGC
genomic: TTTCTTTGCGGCTTATTTGGgtatgtatgt ... taatatgcagGGGATCATTAGCTCAAAATTTCTACTTACAAGCCCTGGCTTTAACTTCTGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAGAAGAGGACAAAGATGACTTGGACGGTACTGTTTCAGTCATTTCTTTGCGGCTTATTTGGgtatgtatgtatgtaagtcttttaattttaatttattgacctgctccttcatcatcgtttccttgacgatgttcttctttcggctttagttttaattcaa
- - - - - - AAGATG