1 5' 3' | 2 5' 3' | 3 5' 3' |
GCAAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattctcttccactgttattcatcagcaatcgaaaacactgctatcaccatttcatctaccctaggctttgtgtttttggagttcaattgaatttt...
species | Glycine max |
transcript | GLYMA08G19320.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGGEST: gi|6666733|gb|AW278192.1|AW278192
genomic: GTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
EST: GTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATG GTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
genomic: GTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattct ... ttgtgaacagGTGAACGTTCCGAAAACAAAGAAGACATACTGCAAGAGTAAGGAGTGCAGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCAAAGCTGAAGTGTCTGCTTCTTCCGATTCCGGCACGCCCCCATCACCATGgtaacattctcttccactgttattcatcagcaatcgaaaacactgctatcaccatttcatctaccctaggctttgtgtttttggagttcaattgaatttt
- AAGCTG
- - AGCTGA
- - - CTGAAG