1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
TTTCATTCCAATTGTATGATCTCAAACAACAAGGTTTTATTGAAAGACAGGAGgtaattttcttttcttgtgatgttgaataaatcaagttttgtccacccaccatgtaggactactttttgactttgtttgggtctccttacaaccaatgag...
species | Glycine max |
transcript | GLYMA07G39940.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: CATTCCAATTGTATGATCTCAAACAACAAGGTTTTATTGAAAGACAGGAG GTAAAACAAATGGTAGTGGCCACTCTAGCCGAATCTGGCEST: gi|151398163|gb|EV268041.1|EV268041
genomic: CATTCCAATTGTATGATCTCAAACAACAAGGTTTTATTGAAAGACAGGAGgtaattttct ... ttgggtatagGTAAAACAAATGGTAGTGGCCACTCTAGCCGAATCTGGC
EST: CATTCCAATTGTATGATCTCAAACAACAAGGTTTTATTGAAAGACAGGAG GTAAAACAAATGGTAGTGGCCACTCTAGCCGAATCTGGCATGAATCTTTCAEST: gi|151404635|gb|EV274449.1|EV274449
genomic: CATTCCAATTGTATGATCTCAAACAACAAGGTTTTATTGAAAGACAGGAGgtaattttct ... ttgggtatagGTAAAACAAATGGTAGTGGCCACTCTAGCCGAATCTGGCATGAATCTTTCA
EST: ATTCCAATTTGTATGATCTCAAACAACAAGGTTTTATTGAAAGACAGGAG GTAAAACAAATGGTAGTGGCCACTCTAGCCGAATCTGGCATGAATCTTTCAEST: gi|192304195|gb|FG993507.1|FG993507
genomic: ATTCCAATT-GTATGATCTCAAACAACAAGGTTTTATTGAAAGACAGGAGgtaattttct ... ttgggtatagGTAAAACAAATGGTAGTGGCCACTCTAGCCGAATCTGGCATGAATCTTTCA
EST: CATTCCAATTGTATGATCTCAAACAACAAGGTTTTATTGAAAGACAGGAG GTAAAACAAATGGTAGTGGCCACTCTAGCCGAATCTGGCATGAATCTTTCAEST: gi|9259434|gb|BE347581.1|BE347581
genomic: CATTCCAATTGTATGATCTCAAACAACAAGGTTTTATTGAAAGACAGGAGgtaattttct ... ttgggtatagGTAAAACAAATGGTAGTGGCCACTCTAGCCGAATCTGGCATGAATCTTTCA
EST: CATTCCAATTGTATGATCTCAAACAACAAGGGTTTATTGAAAGACAGGAG GTAAAACACATGGTAGTGGCCACTCTAGCCGAATCTGGCATGAATCTTTCA
genomic: CATTCCAATTGTATGATCTCAAACAACAAGGTTTTATTGAAAGACAGGAGgtaattttct ... ttgggtatagGTAAAACAAATGGTAGTGGCCACTCTAGCCGAATCTGGCATGAATCTTTCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTTCATTCCAATTGTATGATCTCAAACAACAAGGTTTTATTGAAAGACAGGAGgtaattttcttttcttgtgatgttgaataaatcaagttttgtccacccaccatgtaggactactttttgactttgtttgggtctccttacaaccaatgag
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