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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGTTTGGAAGATGAGGTTGTTAGCAGGACAATCTTGAGACTGGCAAATTTGAAATCTTGGTACAGTTTGTCTTATGGTCGTTTTCAGgtaagattgaatgaaaagatcaatttttgaggtgatgaaatatgacctttgttgctcttattcctaatttttatgattaatgttaaatattagtttttgcattggtcttcacctatgtag

Basic information

species Glycine max
transcript GLYMA0048S00340.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193672977|gb|FK619889.1|FK619889
EST:     AGTTTGTCTTATGGTTCGTTTTCAG                         ATGGAGCTTTGTCTTAATCCTGGCTTGGTC
genomic: AGTTTGTCTTATGG-TCGTTTTCAGgtaagattga ... acctatgtagATGGAGCTTTGTCTTAATCCTGGCTTGGTC