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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TAAGAACAAAGATGGCCAGGAGTTGACAACATATGCTCCTCTTACCATTGTTTGTGATGGTTGCTTCTCAAACTTACGCCGTTCTCTTTGTAATCCTAAGgtgagaactcctttcagcttaattctgtgagagtttccatgatcaaatcagtcaacttcttcctataaactaatctcagcactcgcacccaaaaagcttt...

Basic information

species Glycine max
transcript GLYMA0041S00260.2
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA0041S00260.2 (Glycine max), 5'ss of exon 4
lower sequence: Vv18s0001g08550.t01 (Vitis vinifera), 5'ss of exon 4
TAAGAACAAAGATGGCCAGGAGTTGACAACATATGCTCCTCTTACCATTGTTTGTGATGGTTGCTTCTCAAACTTACGCCGTTCTCTTTGTAATCCTAAGgtgagaactcctttcagcttaattctgtgagagtttccatgatcaaa-tcagtcaacttc--ttcctataaactaatctcagcactcgcacccaaaaagcttt
 ||||  ||||||||  |     ||||| ||||||||||| | |||||||| ||||||||||| ||||||||||| ||||| || |||||||  ||||||||||| |   | |    |||         | |      |  || ||| |||   || | |  ||||  |   |     | |    |  ||||     |     
CAAGACTAAAGATGGTGAAACAATGACAGCATATGCTCCTTTAACCATTGTATGTGATGGTTGTTTCTCAAACTTGCGCCGCTCCCTTTGTACCCCTAAGgtgaggatgacctcagtcttctccaaaataaataaaataaaataaaactcacctaaatacacttccattgttcctgaattatgtttttcaccttgccatt---